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74da0ddc82
...
e727cf35fb
@ -4,12 +4,10 @@ use std::sync::atomic::{AtomicUsize, Ordering};
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use crossbeam_channel::{IntoIter, Receiver, SendError, Sender};
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use hashbrown::HashMap;
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use heed::types::Bytes;
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use memmap2::Mmap;
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use roaring::RoaringBitmap;
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use super::extract::FacetKind;
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use super::StdResult;
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use crate::index::main_key::GEO_RTREE_KEY;
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use crate::update::new::KvReaderFieldId;
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use crate::vector::Embedding;
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use crate::{DocumentId, Index};
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@ -28,9 +26,9 @@ pub fn extractor_writer_channel(cap: usize) -> (ExtractorSender, WriterReceiver)
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)
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}
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pub enum KeyValueEntry {
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Small { key_length: usize, data: Box<[u8]> },
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Large { key_entry: KeyEntry, data: Mmap },
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pub struct KeyValueEntry {
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pub key_length: usize,
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pub data: Box<[u8]>,
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}
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impl KeyValueEntry {
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@ -38,25 +36,14 @@ impl KeyValueEntry {
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let mut data = Vec::with_capacity(key.len() + value.len());
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data.extend_from_slice(key);
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data.extend_from_slice(value);
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KeyValueEntry::Small { key_length: key.len(), data: data.into_boxed_slice() }
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KeyValueEntry { key_length: key.len(), data: data.into_boxed_slice() }
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}
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fn from_large_key_value(key: &[u8], value: Mmap) -> Self {
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KeyValueEntry::Large { key_entry: KeyEntry::from_key(key), data: value }
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}
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pub fn key(&self) -> &[u8] {
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match self {
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KeyValueEntry::Small { key_length, data } => &data[..*key_length],
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KeyValueEntry::Large { key_entry, data: _ } => key_entry.entry(),
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}
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&self.data[..self.key_length]
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}
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pub fn value(&self) -> &[u8] {
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match self {
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KeyValueEntry::Small { key_length, data } => &data[*key_length..],
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KeyValueEntry::Large { key_entry: _, data } => &data[..],
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}
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&self.data[self.key_length..]
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}
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}
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@ -111,7 +98,6 @@ pub struct DbOperation {
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#[derive(Debug)]
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pub enum Database {
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Main,
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Documents,
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ExternalDocumentsIds,
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ExactWordDocids,
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@ -130,7 +116,6 @@ pub enum Database {
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impl Database {
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pub fn database(&self, index: &Index) -> heed::Database<Bytes, Bytes> {
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match self {
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Database::Main => index.main.remap_types(),
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Database::Documents => index.documents.remap_types(),
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Database::ExternalDocumentsIds => index.external_documents_ids.remap_types(),
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Database::ExactWordDocids => index.exact_word_docids.remap_types(),
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@ -223,10 +208,6 @@ impl ExtractorSender {
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EmbeddingSender(&self.sender)
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}
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pub fn geo(&self) -> GeoSender<'_> {
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GeoSender(&self.sender)
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}
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fn send_delete_vector(&self, docid: DocumentId) -> StdResult<(), SendError<()>> {
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match self
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.sender
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@ -446,19 +427,3 @@ impl EmbeddingSender<'_> {
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.map_err(|_| SendError(()))
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}
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}
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pub struct GeoSender<'a>(&'a Sender<WriterOperation>);
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impl GeoSender<'_> {
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pub fn set_rtree(&self, value: Mmap) -> StdResult<(), SendError<()>> {
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self.0
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.send(WriterOperation::DbOperation(DbOperation {
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database: Database::Main,
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entry: EntryOperation::Write(KeyValueEntry::from_large_key_value(
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GEO_RTREE_KEY.as_bytes(),
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value,
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)),
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}))
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.map_err(|_| SendError(()))
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}
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}
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|
@ -1,24 +1,26 @@
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use std::cell::RefCell;
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use std::f32::consts::PI;
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use std::fs::File;
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use std::io::{self, BufReader, BufWriter, ErrorKind, Read, Write as _};
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use std::{iter, mem, result};
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use std::io::{self, BufWriter};
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use std::mem::{self, size_of};
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use bincode::ErrorKind;
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use bumpalo::Bump;
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use bytemuck::{bytes_of, from_bytes, pod_read_unaligned, Pod, Zeroable};
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use heed::RoTxn;
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use serde_json::value::RawValue;
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use serde_json::Value;
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use raw_collections::bbbul::BitPacker4x;
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use raw_collections::Bbbul;
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use uell::Uell;
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use crate::error::GeoError;
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use crate::update::new::document::Document;
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use crate::update::new::indexer::document_changes::{DocumentChangeContext, Extractor, MostlySend};
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use crate::update::new::ref_cell_ext::RefCellExt as _;
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use crate::update::new::DocumentChange;
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use crate::update::GrenadParameters;
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use crate::{lat_lng_to_xyz, DocumentId, GeoPoint, Index, InternalError, Object, Result};
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use crate::{DocumentId, Index, Result};
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pub struct GeoExtractor {
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grenad_parameters: GrenadParameters,
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// rtree: Option<rstar::RTree<GeoPoint>>,
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}
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impl GeoExtractor {
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@ -37,109 +39,29 @@ impl GeoExtractor {
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}
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}
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#[derive(Pod, Zeroable, Copy, Clone)]
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#[repr(C, packed)]
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pub struct ExtractedGeoPoint {
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pub docid: DocumentId,
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pub lat_lng: [f64; 2],
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}
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impl From<ExtractedGeoPoint> for GeoPoint {
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/// Converts the latitude and longitude back to an xyz GeoPoint.
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fn from(value: ExtractedGeoPoint) -> Self {
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let [lat, lng] = value.lat_lng;
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let point = [lat, lng];
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let xyz_point = lat_lng_to_xyz(&point);
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GeoPoint::new(xyz_point, (value.docid, point))
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}
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}
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pub struct GeoExtractorData<'extractor> {
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/// The set of documents ids that were removed. If a document sees its geo
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/// point being updated, we first put it in the deleted and then in the inserted.
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removed: bumpalo::collections::Vec<'extractor, ExtractedGeoPoint>,
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inserted: bumpalo::collections::Vec<'extractor, ExtractedGeoPoint>,
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/// point being updated, we first delete it and then insert it in the inserted.
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removed: Bbbul<'extractor, BitPacker4x>,
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/// The set of document ids associated to the two f64 geo points.
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inserted: Uell<'extractor, [u8; size_of::<DocumentId>() + 2 * size_of::<f64>()]>,
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/// TODO Do the doc
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spilled_removed: Option<BufWriter<File>>,
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/// TODO Do the doc
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spilled_inserted: Option<BufWriter<File>>,
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}
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impl<'extractor> GeoExtractorData<'extractor> {
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pub fn freeze(self) -> Result<FrozenGeoExtractorData<'extractor>> {
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let GeoExtractorData { removed, inserted, spilled_removed, spilled_inserted } = self;
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Ok(FrozenGeoExtractorData {
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removed: removed.into_bump_slice(),
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inserted: inserted.into_bump_slice(),
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spilled_removed: spilled_removed
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.map(|bw| bw.into_inner().map(BufReader::new).map_err(|iie| iie.into_error()))
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.transpose()?,
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spilled_inserted: spilled_inserted
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.map(|bw| bw.into_inner().map(BufReader::new).map_err(|iie| iie.into_error()))
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.transpose()?,
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})
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}
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}
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unsafe impl MostlySend for GeoExtractorData<'_> {}
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pub struct FrozenGeoExtractorData<'extractor> {
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pub removed: &'extractor [ExtractedGeoPoint],
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pub inserted: &'extractor [ExtractedGeoPoint],
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pub spilled_removed: Option<BufReader<File>>,
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pub spilled_inserted: Option<BufReader<File>>,
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}
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impl<'extractor> FrozenGeoExtractorData<'extractor> {
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pub fn iter_and_clear_removed(
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&mut self,
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) -> impl IntoIterator<Item = io::Result<ExtractedGeoPoint>> + '_ {
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mem::take(&mut self.removed)
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.iter()
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.copied()
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.map(Ok)
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.chain(iterator_over_spilled_geopoints(&mut self.spilled_removed))
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}
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pub fn iter_and_clear_inserted(
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&mut self,
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) -> impl IntoIterator<Item = io::Result<ExtractedGeoPoint>> + '_ {
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mem::take(&mut self.inserted)
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.iter()
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.copied()
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.map(Ok)
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.chain(iterator_over_spilled_geopoints(&mut self.spilled_inserted))
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}
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}
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fn iterator_over_spilled_geopoints(
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spilled: &mut Option<BufReader<File>>,
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) -> impl IntoIterator<Item = io::Result<ExtractedGeoPoint>> + '_ {
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let mut spilled = spilled.take();
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iter::from_fn(move || match &mut spilled {
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Some(file) => {
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let geopoint_bytes = &mut [0u8; mem::size_of::<ExtractedGeoPoint>()];
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match file.read_exact(geopoint_bytes) {
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Ok(()) => Some(Ok(pod_read_unaligned(geopoint_bytes))),
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Err(e) if e.kind() == ErrorKind::UnexpectedEof => None,
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Err(e) => Some(Err(e)),
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||||
}
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||||
}
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None => None,
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||||
})
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}
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impl<'extractor> Extractor<'extractor> for GeoExtractor {
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type Data = RefCell<GeoExtractorData<'extractor>>;
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fn init_data<'doc>(&'doc self, extractor_alloc: &'extractor Bump) -> Result<Self::Data> {
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Ok(RefCell::new(GeoExtractorData {
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removed: bumpalo::collections::Vec::new_in(extractor_alloc),
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// inserted: Uell::new_in(extractor_alloc),
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inserted: bumpalo::collections::Vec::new_in(extractor_alloc),
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spilled_inserted: None,
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inserted: Uell::new_in(extractor_alloc),
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removed: Bbbul::new_in(extractor_alloc),
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spilled_removed: None,
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spilled_inserted: None,
|
||||
}))
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}
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@ -150,153 +72,22 @@ impl<'extractor> Extractor<'extractor> for GeoExtractor {
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) -> Result<()> {
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let rtxn = &context.rtxn;
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let index = context.index;
|
||||
let max_memory = self.grenad_parameters.max_memory;
|
||||
let db_fields_ids_map = context.db_fields_ids_map;
|
||||
let mut data_ref = context.data.borrow_mut_or_yield();
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||||
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for change in changes {
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if max_memory.map_or(false, |mm| context.extractor_alloc.allocated_bytes() >= mm) {
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// We must spill as we allocated too much memory
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data_ref.spilled_removed = tempfile::tempfile().map(BufWriter::new).map(Some)?;
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||||
data_ref.spilled_inserted = tempfile::tempfile().map(BufWriter::new).map(Some)?;
|
||||
}
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||||
|
||||
match change? {
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DocumentChange::Deletion(deletion) => {
|
||||
let docid = deletion.docid();
|
||||
let external_id = deletion.external_document_id();
|
||||
let current = deletion.current(rtxn, index, db_fields_ids_map)?;
|
||||
let current_geo = current
|
||||
.geo_field()?
|
||||
.map(|geo| extract_geo_coordinates(external_id, geo))
|
||||
.transpose()?;
|
||||
|
||||
if let Some(lat_lng) = current_geo.flatten() {
|
||||
let geopoint = ExtractedGeoPoint { docid, lat_lng };
|
||||
match &mut data_ref.spilled_removed {
|
||||
Some(file) => file.write_all(bytes_of(&geopoint))?,
|
||||
None => data_ref.removed.push(geopoint),
|
||||
}
|
||||
}
|
||||
}
|
||||
DocumentChange::Deletion(deletion) => todo!(),
|
||||
DocumentChange::Update(update) => {
|
||||
let current = update.current(rtxn, index, db_fields_ids_map)?;
|
||||
let external_id = update.external_document_id();
|
||||
let docid = update.docid();
|
||||
|
||||
let current_geo = current
|
||||
.geo_field()?
|
||||
.map(|geo| extract_geo_coordinates(external_id, geo))
|
||||
.transpose()?;
|
||||
|
||||
let updated_geo = update
|
||||
.updated()
|
||||
.geo_field()?
|
||||
.map(|geo| extract_geo_coordinates(external_id, geo))
|
||||
.transpose()?;
|
||||
|
||||
if current_geo != updated_geo {
|
||||
// If the current and new geo points are different it means that
|
||||
// we need to replace the current by the new point and therefore
|
||||
// delete the current point from the RTree.
|
||||
if let Some(lat_lng) = current_geo.flatten() {
|
||||
let geopoint = ExtractedGeoPoint { docid, lat_lng };
|
||||
match &mut data_ref.spilled_removed {
|
||||
Some(file) => file.write_all(bytes_of(&geopoint))?,
|
||||
None => data_ref.removed.push(geopoint),
|
||||
}
|
||||
}
|
||||
|
||||
if let Some(lat_lng) = updated_geo.flatten() {
|
||||
let geopoint = ExtractedGeoPoint { docid, lat_lng };
|
||||
match &mut data_ref.spilled_inserted {
|
||||
Some(file) => file.write_all(bytes_of(&geopoint))?,
|
||||
None => data_ref.inserted.push(geopoint),
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
DocumentChange::Insertion(insertion) => {
|
||||
let external_id = insertion.external_document_id();
|
||||
let docid = insertion.docid();
|
||||
|
||||
let inserted_geo = insertion
|
||||
.inserted()
|
||||
.geo_field()?
|
||||
.map(|geo| extract_geo_coordinates(external_id, geo))
|
||||
.transpose()?;
|
||||
|
||||
if let Some(lat_lng) = inserted_geo.flatten() {
|
||||
let geopoint = ExtractedGeoPoint { docid, lat_lng };
|
||||
match &mut data_ref.spilled_inserted {
|
||||
Some(file) => file.write_all(bytes_of(&geopoint))?,
|
||||
None => data_ref.inserted.push(geopoint),
|
||||
}
|
||||
}
|
||||
let current_geo = current.geo_field()?;
|
||||
let updated_geo = update.updated().geo_field()?;
|
||||
// ...
|
||||
}
|
||||
DocumentChange::Insertion(insertion) => {}
|
||||
}
|
||||
}
|
||||
|
||||
Ok(())
|
||||
}
|
||||
}
|
||||
|
||||
/// Extracts and validate the latitude and latitude from a document geo field.
|
||||
///
|
||||
/// It can be of the form `{ "lat": 0.0, "lng": "1.0" }`.
|
||||
fn extract_geo_coordinates(external_id: &str, raw_value: &RawValue) -> Result<Option<[f64; 2]>> {
|
||||
let mut geo = match serde_json::from_str(raw_value.get()).map_err(InternalError::SerdeJson)? {
|
||||
Value::Null => return Ok(None),
|
||||
Value::Object(map) => map,
|
||||
value => {
|
||||
return Err(
|
||||
GeoError::NotAnObject { document_id: Value::from(external_id), value }.into()
|
||||
)
|
||||
}
|
||||
};
|
||||
|
||||
let [lat, lng] = match (geo.remove("lat"), geo.remove("lng")) {
|
||||
(Some(lat), Some(lng)) => [lat, lng],
|
||||
(Some(_), None) => {
|
||||
return Err(GeoError::MissingLatitude { document_id: Value::from(external_id) }.into())
|
||||
}
|
||||
(None, Some(_)) => {
|
||||
return Err(GeoError::MissingLongitude { document_id: Value::from(external_id) }.into())
|
||||
}
|
||||
(None, None) => {
|
||||
return Err(GeoError::MissingLatitudeAndLongitude {
|
||||
document_id: Value::from(external_id),
|
||||
}
|
||||
.into())
|
||||
}
|
||||
};
|
||||
|
||||
let lat = extract_finite_float_from_value(lat)
|
||||
.map_err(|value| GeoError::BadLatitude { document_id: Value::from(external_id), value })?;
|
||||
|
||||
let lng = extract_finite_float_from_value(lng)
|
||||
.map_err(|value| GeoError::BadLongitude { document_id: Value::from(external_id), value })?;
|
||||
|
||||
Ok(Some([lat, lng]))
|
||||
}
|
||||
|
||||
/// Extracts and validate that a serde JSON Value is actually a finite f64.
|
||||
pub fn extract_finite_float_from_value(value: Value) -> result::Result<f64, Value> {
|
||||
let number = match value {
|
||||
Value::Number(ref n) => match n.as_f64() {
|
||||
Some(number) => number,
|
||||
None => return Err(value),
|
||||
},
|
||||
Value::String(ref s) => match s.parse::<f64>() {
|
||||
Ok(number) => number,
|
||||
Err(_) => return Err(value),
|
||||
},
|
||||
value => return Err(value),
|
||||
};
|
||||
|
||||
if number.is_finite() {
|
||||
Ok(number)
|
||||
} else {
|
||||
Err(value)
|
||||
}
|
||||
}
|
||||
|
@ -32,7 +32,6 @@ use crate::index::main_key::{WORDS_FST_KEY, WORDS_PREFIXES_FST_KEY};
|
||||
use crate::proximity::ProximityPrecision;
|
||||
use crate::update::del_add::DelAdd;
|
||||
use crate::update::new::extract::EmbeddingExtractor;
|
||||
use crate::update::new::merger::merge_and_send_rtree;
|
||||
use crate::update::new::words_prefix_docids::compute_exact_word_prefix_docids;
|
||||
use crate::update::new::{merge_and_send_docids, merge_and_send_facet_docids, FacetDatabases};
|
||||
use crate::update::settings::InnerIndexSettings;
|
||||
@ -57,7 +56,6 @@ mod steps {
|
||||
"extracting words",
|
||||
"extracting word proximity",
|
||||
"extracting embeddings",
|
||||
"writing geo points",
|
||||
"writing to database",
|
||||
"writing embeddings to database",
|
||||
"waiting for extractors",
|
||||
@ -94,32 +92,28 @@ mod steps {
|
||||
step(4)
|
||||
}
|
||||
|
||||
pub const fn extract_geo_points() -> (u16, &'static str) {
|
||||
pub const fn write_db() -> (u16, &'static str) {
|
||||
step(5)
|
||||
}
|
||||
|
||||
pub const fn write_db() -> (u16, &'static str) {
|
||||
pub const fn write_embedding_db() -> (u16, &'static str) {
|
||||
step(6)
|
||||
}
|
||||
|
||||
pub const fn write_embedding_db() -> (u16, &'static str) {
|
||||
pub const fn waiting_extractors() -> (u16, &'static str) {
|
||||
step(7)
|
||||
}
|
||||
|
||||
pub const fn waiting_extractors() -> (u16, &'static str) {
|
||||
pub const fn post_processing_facets() -> (u16, &'static str) {
|
||||
step(8)
|
||||
}
|
||||
|
||||
pub const fn post_processing_facets() -> (u16, &'static str) {
|
||||
pub const fn post_processing_words() -> (u16, &'static str) {
|
||||
step(9)
|
||||
}
|
||||
|
||||
pub const fn post_processing_words() -> (u16, &'static str) {
|
||||
step(10)
|
||||
}
|
||||
|
||||
pub const fn finalizing() -> (u16, &'static str) {
|
||||
step(11)
|
||||
step(10)
|
||||
}
|
||||
}
|
||||
|
||||
@ -330,15 +324,7 @@ where
|
||||
|
||||
let (finished_steps, step_name) = steps::extract_word_proximity();
|
||||
|
||||
let caches = <WordPairProximityDocidsExtractor as DocidsExtractor>::run_extraction(grenad_parameters,
|
||||
document_changes,
|
||||
indexing_context,
|
||||
&mut extractor_allocs,
|
||||
finished_steps,
|
||||
total_steps,
|
||||
step_name,
|
||||
)?;
|
||||
|
||||
let caches = <WordPairProximityDocidsExtractor as DocidsExtractor>::run_extraction(grenad_parameters, document_changes, indexing_context, &mut extractor_allocs, finished_steps, total_steps, step_name)?;
|
||||
merge_and_send_docids(
|
||||
caches,
|
||||
index.word_pair_proximity_docids.remap_types(),
|
||||
@ -361,15 +347,10 @@ where
|
||||
let extractor = EmbeddingExtractor::new(embedders, &embedding_sender, field_distribution, request_threads());
|
||||
let datastore = ThreadLocal::with_capacity(pool.current_num_threads());
|
||||
let (finished_steps, step_name) = steps::extract_embeddings();
|
||||
extract(document_changes,
|
||||
&extractor,
|
||||
indexing_context,
|
||||
&mut extractor_allocs,
|
||||
&datastore,
|
||||
finished_steps,
|
||||
total_steps,
|
||||
step_name,
|
||||
)?;
|
||||
|
||||
|
||||
extract(document_changes, &extractor, indexing_context, &mut extractor_allocs, &datastore, finished_steps, total_steps, step_name)?;
|
||||
|
||||
|
||||
let mut user_provided = HashMap::new();
|
||||
for data in datastore {
|
||||
@ -388,35 +369,6 @@ where
|
||||
embedding_sender.finish(user_provided).unwrap();
|
||||
}
|
||||
|
||||
'geo: {
|
||||
let span = tracing::trace_span!(target: "indexing::documents::extract", "geo");
|
||||
let _entered = span.enter();
|
||||
|
||||
// let geo_sender = extractor_sender.geo_points();
|
||||
let Some(extractor) = GeoExtractor::new(&rtxn, index, grenad_parameters)? else {
|
||||
break 'geo;
|
||||
};
|
||||
let datastore = ThreadLocal::with_capacity(pool.current_num_threads());
|
||||
let (finished_steps, step_name) = steps::extract_geo_points();
|
||||
extract(document_changes,
|
||||
&extractor,
|
||||
indexing_context,
|
||||
&mut extractor_allocs,
|
||||
&datastore,
|
||||
finished_steps,
|
||||
total_steps,
|
||||
step_name,
|
||||
)?;
|
||||
|
||||
merge_and_send_rtree(
|
||||
datastore,
|
||||
&rtxn,
|
||||
index,
|
||||
extractor_sender.geo(),
|
||||
&indexing_context.must_stop_processing,
|
||||
)?;
|
||||
}
|
||||
|
||||
// TODO THIS IS TOO MUCH
|
||||
// - [ ] Extract fieldid docid facet number
|
||||
// - [ ] Extract fieldid docid facet string
|
||||
|
@ -1,59 +1,14 @@
|
||||
use std::cell::RefCell;
|
||||
use std::io;
|
||||
|
||||
use hashbrown::HashSet;
|
||||
use heed::types::Bytes;
|
||||
use heed::{Database, RoTxn};
|
||||
use memmap2::Mmap;
|
||||
use rayon::iter::{IntoParallelIterator, ParallelIterator};
|
||||
use roaring::RoaringBitmap;
|
||||
|
||||
use super::channel::*;
|
||||
use super::extract::{
|
||||
merge_caches, transpose_and_freeze_caches, BalancedCaches, DelAddRoaringBitmap, FacetKind,
|
||||
GeoExtractorData,
|
||||
};
|
||||
use crate::{CboRoaringBitmapCodec, FieldId, GeoPoint, Index, InternalError, Result};
|
||||
|
||||
#[tracing::instrument(level = "trace", skip_all, target = "indexing::merge")]
|
||||
pub fn merge_and_send_rtree<'extractor, MSP>(
|
||||
datastore: impl IntoIterator<Item = RefCell<GeoExtractorData<'extractor>>>,
|
||||
rtxn: &RoTxn,
|
||||
index: &Index,
|
||||
geo_sender: GeoSender<'_>,
|
||||
must_stop_processing: &MSP,
|
||||
) -> Result<()>
|
||||
where
|
||||
MSP: Fn() -> bool + Sync,
|
||||
{
|
||||
let mut rtree = index.geo_rtree(rtxn)?.unwrap_or_default();
|
||||
for data in datastore {
|
||||
if must_stop_processing() {
|
||||
return Err(InternalError::AbortedIndexation.into());
|
||||
}
|
||||
|
||||
let mut frozen = data.into_inner().freeze()?;
|
||||
for result in frozen.iter_and_clear_removed() {
|
||||
let extracted_geo_point = result?;
|
||||
rtree.remove(&GeoPoint::from(extracted_geo_point));
|
||||
}
|
||||
|
||||
for result in frozen.iter_and_clear_inserted() {
|
||||
let extracted_geo_point = result?;
|
||||
rtree.insert(GeoPoint::from(extracted_geo_point));
|
||||
}
|
||||
}
|
||||
|
||||
let mut file = tempfile::tempfile()?;
|
||||
/// manage error
|
||||
bincode::serialize_into(&mut file, dbg!(&rtree)).unwrap();
|
||||
file.sync_all()?;
|
||||
|
||||
let rtree_mmap = unsafe { Mmap::map(&file)? };
|
||||
geo_sender.set_rtree(rtree_mmap).unwrap();
|
||||
|
||||
Ok(())
|
||||
}
|
||||
use crate::{CboRoaringBitmapCodec, FieldId, Index, InternalError, Result};
|
||||
|
||||
#[tracing::instrument(level = "trace", skip_all, target = "indexing::merge")]
|
||||
pub fn merge_and_send_docids<'extractor, MSP>(
|
||||
|
Loading…
Reference in New Issue
Block a user