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Optimize cbo roaring bitmaps merge
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@ -52,6 +52,46 @@ impl CboRoaringBitmapCodec {
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RoaringBitmap::deserialize_from(bytes)
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}
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}
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/// Merge serialized CboRoaringBitmaps in a buffer.
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///
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/// if the merged values len is under the threshold,
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/// values are directly serialized in the buffer;
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/// else a RoaringBitmap is created from the values and is serialized in the buffer.
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pub fn merge_into(slices: &[Cow<[u8]>], buffer: &mut Vec<u8>) -> io::Result<()> {
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let mut roaring = RoaringBitmap::new();
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let mut vec = Vec::new();
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for bytes in slices {
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if bytes.len() <= THRESHOLD * size_of::<u32>() {
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let mut reader = bytes.as_ref();
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while let Ok(integer) = reader.read_u32::<NativeEndian>() {
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vec.push(integer);
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}
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} else {
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roaring |= RoaringBitmap::deserialize_from(bytes.as_ref())?;
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}
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}
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if roaring.is_empty() {
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vec.sort_unstable();
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vec.dedup();
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if vec.len() <= THRESHOLD {
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for integer in vec {
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buffer.extend_from_slice(&integer.to_ne_bytes());
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}
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} else {
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let roaring = RoaringBitmap::from_sorted_iter(vec.into_iter());
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roaring.serialize_into(buffer)?;
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}
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} else {
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roaring.extend(vec);
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roaring.serialize_into(buffer)?;
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}
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Ok(())
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}
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}
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impl heed::BytesDecode<'_> for CboRoaringBitmapCodec {
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@ -106,4 +146,40 @@ mod tests {
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assert!(roaring_size > bo_size);
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}
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#[test]
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fn merge_cbo_roaring_bitmaps() {
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let mut buffer = Vec::new();
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let small_data = vec![
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RoaringBitmap::from_sorted_iter(1..4),
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RoaringBitmap::from_sorted_iter(2..5),
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RoaringBitmap::from_sorted_iter(4..6),
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RoaringBitmap::from_sorted_iter(1..3),
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];
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let small_data: Vec<_> =
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small_data.iter().map(|b| CboRoaringBitmapCodec::bytes_encode(b).unwrap()).collect();
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CboRoaringBitmapCodec::merge_into(small_data.as_slice(), &mut buffer).unwrap();
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let bitmap = CboRoaringBitmapCodec::deserialize_from(&buffer).unwrap();
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let expected = RoaringBitmap::from_sorted_iter(1..6);
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assert_eq!(bitmap, expected);
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let medium_data = vec![
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RoaringBitmap::from_sorted_iter(1..4),
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RoaringBitmap::from_sorted_iter(2..5),
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RoaringBitmap::from_sorted_iter(4..8),
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RoaringBitmap::from_sorted_iter(0..3),
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RoaringBitmap::from_sorted_iter(7..23),
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];
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let medium_data: Vec<_> =
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medium_data.iter().map(|b| CboRoaringBitmapCodec::bytes_encode(b).unwrap()).collect();
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buffer.clear();
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CboRoaringBitmapCodec::merge_into(medium_data.as_slice(), &mut buffer).unwrap();
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let bitmap = CboRoaringBitmapCodec::deserialize_from(&buffer).unwrap();
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let expected = RoaringBitmap::from_sorted_iter(0..23);
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assert_eq!(bitmap, expected);
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}
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}
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@ -120,52 +120,11 @@ pub fn merge_cbo_roaring_bitmaps<'a>(
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_key: &[u8],
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values: &[Cow<'a, [u8]>],
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) -> Result<Cow<'a, [u8]>> {
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match values.split_first().unwrap() {
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(head, []) => Ok(head.clone()),
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(head, tail) => {
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let mut head = CboRoaringBitmapCodec::deserialize_from(&head[..])?;
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for value in tail {
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head |= CboRoaringBitmapCodec::deserialize_from(&value[..])?;
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}
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if values.len() == 1 {
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Ok(values[0].clone())
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} else {
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let mut vec = Vec::new();
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CboRoaringBitmapCodec::serialize_into(&head, &mut vec);
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CboRoaringBitmapCodec::merge_into(values, &mut vec)?;
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Ok(Cow::from(vec))
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}
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}
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}
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// /// Uses the FacetStringLevelZeroValueCodec to merge the values.
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// pub fn tuple_string_cbo_roaring_bitmap_merge<'a>(
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// _key: &[u8],
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// values: &[Cow<[u8]>],
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// ) -> Result<Cow<'a, [u8]>> {
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// let (head, tail) = values.split_first().unwrap();
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// let (head_string, mut head_rb) = FacetStringLevelZeroValueCodec::bytes_decode(&head[..])
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// .ok_or(SerializationError::Decoding { db_name: None })?;
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// for value in tail {
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// let (_string, rb) = FacetStringLevelZeroValueCodec::bytes_decode(&value[..])
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// .ok_or(SerializationError::Decoding { db_name: None })?;
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// head_rb |= rb;
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// }
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// FacetStringLevelZeroValueCodec::bytes_encode(&(head_string, head_rb))
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// .map(|cow| cow.into_owned())
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// .ok_or(SerializationError::Encoding { db_name: None })
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// .map_err(Into::into)
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// }
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// pub fn cbo_roaring_bitmap_merge<'a>(_key: &[u8], values: &[Cow<[u8]>]) -> Result<Cow<'a, [u8]>> {
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// let (head, tail) = values.split_first().unwrap();
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// let mut head = CboRoaringBitmapCodec::deserialize_from(&head[..])?;
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// for value in tail {
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// head |= CboRoaringBitmapCodec::deserialize_from(&value[..])?;
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// }
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// let mut vec = Vec::new();
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// CboRoaringBitmapCodec::serialize_into(&head, &mut vec);
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// Ok(vec)
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// }
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@ -188,15 +188,22 @@ fn merge_roaring_bitmaps(new_value: &[u8], db_value: &[u8], buffer: &mut Vec<u8>
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Ok(serialize_roaring_bitmap(&value, buffer)?)
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}
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use std::borrow::Cow;
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fn merge_cbo_roaring_bitmaps(
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new_value: &[u8],
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db_value: &[u8],
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buffer: &mut Vec<u8>,
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) -> Result<()> {
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let new_value = CboRoaringBitmapCodec::deserialize_from(new_value)?;
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let db_value = CboRoaringBitmapCodec::deserialize_from(db_value)?;
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let value = new_value | db_value;
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Ok(CboRoaringBitmapCodec::serialize_into(&value, buffer))
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Ok(CboRoaringBitmapCodec::merge_into(
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&[Cow::Borrowed(db_value), Cow::Borrowed(new_value)],
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buffer,
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)?)
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// let new_value = CboRoaringBitmapCodec::deserialize_from(new_value)?;
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// let db_value = CboRoaringBitmapCodec::deserialize_from(db_value)?;
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// let value = new_value | db_value;
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// Ok(CboRoaringBitmapCodec::serialize_into(&value, buffer))
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}
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/// Write provided entries in database using serialize_value function.
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