467: optimize prefix database r=Kerollmops a=MarinPostma

This pr introduces two optimizations that greatly improve the speed of computing prefix databases.

- The time that it takes to create the prefix FST has been divided by 5 by inverting the way we iterated over the words FST.
- We unconditionally and needlessly checked for documents to remove in  `word_prefix_pair`, which caused an iteration over the whole database.

Co-authored-by: ad hoc <postma.marin@protonmail.com>
This commit is contained in:
bors[bot] 2022-03-15 16:14:35 +00:00 committed by GitHub
commit 8efac33b53
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2 changed files with 31 additions and 29 deletions

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@ -155,20 +155,20 @@ impl<'t, 'u, 'i> WordPrefixPairProximityDocids<'t, 'u, 'i> {
// All of the word prefix pairs in the database that have a w2 // All of the word prefix pairs in the database that have a w2
// that is contained in the `suppr_pw` set must be removed as well. // that is contained in the `suppr_pw` set must be removed as well.
let mut iter = self if !del_prefix_fst_words.is_empty() {
.index let mut iter = self
.word_prefix_pair_proximity_docids .index
.remap_data_type::<ByteSlice>() .word_prefix_pair_proximity_docids
.iter_mut(self.wtxn)?; .remap_data_type::<ByteSlice>()
while let Some(((_, w2, _), _)) = iter.next().transpose()? { .iter_mut(self.wtxn)?;
if del_prefix_fst_words.contains(w2.as_bytes()) { while let Some(((_, w2, _), _)) = iter.next().transpose()? {
// Delete this entry as the w2 prefix is no more in the words prefix fst. if del_prefix_fst_words.contains(w2.as_bytes()) {
unsafe { iter.del_current()? }; // Delete this entry as the w2 prefix is no more in the words prefix fst.
unsafe { iter.del_current()? };
}
} }
} }
drop(iter);
// We finally write and merge the new word prefix pair proximity docids // We finally write and merge the new word prefix pair proximity docids
// in the LMDB database. // in the LMDB database.
sorter_into_lmdb_database( sorter_into_lmdb_database(

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@ -1,7 +1,7 @@
use std::iter::FromIterator; use std::iter::{repeat_with, FromIterator};
use std::str; use std::str;
use fst::Streamer; use fst::{SetBuilder, Streamer};
use crate::{Index, Result, SmallString32}; use crate::{Index, Result, SmallString32};
@ -44,43 +44,45 @@ impl<'t, 'u, 'i> WordsPrefixesFst<'t, 'u, 'i> {
pub fn execute(self) -> Result<()> { pub fn execute(self) -> Result<()> {
let words_fst = self.index.words_fst(&self.wtxn)?; let words_fst = self.index.words_fst(&self.wtxn)?;
let mut prefix_fsts = Vec::with_capacity(self.max_prefix_length); let mut current_prefix = vec![SmallString32::new(); self.max_prefix_length];
for n in 1..=self.max_prefix_length { let mut current_prefix_count = vec![0; self.max_prefix_length];
let mut current_prefix = SmallString32::new(); let mut builders =
let mut current_prefix_count = 0; repeat_with(SetBuilder::memory).take(self.max_prefix_length).collect::<Vec<_>>();
let mut builder = fst::SetBuilder::memory();
let mut stream = words_fst.stream();
while let Some(bytes) = stream.next() {
for n in 0..self.max_prefix_length {
let current_prefix = &mut current_prefix[n];
let current_prefix_count = &mut current_prefix_count[n];
let builder = &mut builders[n];
let mut stream = words_fst.stream();
while let Some(bytes) = stream.next() {
// We try to get the first n bytes out of this string but we only want // We try to get the first n bytes out of this string but we only want
// to split at valid characters bounds. If we try to split in the middle of // to split at valid characters bounds. If we try to split in the middle of
// a character we ignore this word and go to the next one. // a character we ignore this word and go to the next one.
let word = str::from_utf8(bytes)?; let word = str::from_utf8(bytes)?;
let prefix = match word.get(..n) { let prefix = match word.get(..=n) {
Some(prefix) => prefix, Some(prefix) => prefix,
None => continue, None => continue,
}; };
// This is the first iteration of the loop, // This is the first iteration of the loop,
// or the current word doesn't starts with the current prefix. // or the current word doesn't starts with the current prefix.
if current_prefix_count == 0 || prefix != current_prefix.as_str() { if *current_prefix_count == 0 || prefix != current_prefix.as_str() {
current_prefix = SmallString32::from(prefix); *current_prefix = SmallString32::from(prefix);
current_prefix_count = 0; *current_prefix_count = 0;
} }
current_prefix_count += 1; *current_prefix_count += 1;
// There is enough words corresponding to this prefix to add it to the cache. // There is enough words corresponding to this prefix to add it to the cache.
if current_prefix_count >= self.threshold { if *current_prefix_count >= self.threshold {
builder.insert(prefix)?; builder.insert(prefix)?;
} }
} }
// We construct the final set for prefixes of size n.
prefix_fsts.push(builder.into_set());
} }
// We merge all of the previously computed prefixes into on final set. // We merge all of the previously computed prefixes into on final set.
let prefix_fsts: Vec<_> = builders.into_iter().map(|sb| sb.into_set()).collect();
let op = fst::set::OpBuilder::from_iter(prefix_fsts.iter()); let op = fst::set::OpBuilder::from_iter(prefix_fsts.iter());
let mut builder = fst::SetBuilder::memory(); let mut builder = fst::SetBuilder::memory();
builder.extend_stream(op.r#union())?; builder.extend_stream(op.r#union())?;