diff --git a/index-scheduler/src/lib.rs b/index-scheduler/src/lib.rs
index c5ae1c31f..e2a6f03a0 100644
--- a/index-scheduler/src/lib.rs
+++ b/index-scheduler/src/lib.rs
@@ -2016,6 +2016,7 @@ mod tests {
         // Wait for one successful batch.
         #[track_caller]
         fn advance_one_successful_batch(&mut self) {
+            self.index_scheduler.assert_internally_consistent();
             self.advance_till([Start, BatchCreated]);
             loop {
                 match self.advance() {
@@ -2025,12 +2026,16 @@ mod tests {
                     // the batch went successfully, we can stop the loop and go on with the next states.
                     ProcessBatchSucceeded => break,
                     AbortedIndexation => panic!("The batch was aborted.\n{}", snapshot_index_scheduler(&self.index_scheduler)),
-                    ProcessBatchFailed => panic!("The batch failed.\n{}", snapshot_index_scheduler(&self.index_scheduler)),
+                    ProcessBatchFailed => {
+                        while self.advance() != Start {}
+                        panic!("The batch failed.\n{}", snapshot_index_scheduler(&self.index_scheduler))
+                    },
                     breakpoint => panic!("Encountered an impossible breakpoint `{:?}`, this is probably an issue with the test suite.", breakpoint),
                 }
             }
 
             self.advance_till([AfterProcessing]);
+            self.index_scheduler.assert_internally_consistent();
         }
 
         // Wait for one failed batch.
@@ -5012,7 +5017,6 @@ mod tests {
                 false,
             )
             .unwrap();
-        index_scheduler.assert_internally_consistent();
 
         snapshot!(snapshot_index_scheduler(&index_scheduler), name: "after_registering_settings_task_vectors");
 
@@ -5105,7 +5109,6 @@ mod tests {
                 false,
             )
             .unwrap();
-        index_scheduler.assert_internally_consistent();
 
         snapshot!(snapshot_index_scheduler(&index_scheduler), name: "after adding Intel");
 
@@ -5180,7 +5183,6 @@ mod tests {
                 false,
             )
             .unwrap();
-        index_scheduler.assert_internally_consistent();
 
         snapshot!(snapshot_index_scheduler(&index_scheduler), name: "Intel to kefir");
 
@@ -5303,9 +5305,7 @@ mod tests {
                 false,
             )
             .unwrap();
-        index_scheduler.assert_internally_consistent();
         handle.advance_one_successful_batch();
-        index_scheduler.assert_internally_consistent();
 
         let index = index_scheduler.index("doggos").unwrap();
         let rtxn = index.read_txn().unwrap();
@@ -5452,9 +5452,7 @@ mod tests {
                 false,
             )
             .unwrap();
-        index_scheduler.assert_internally_consistent();
         handle.advance_one_successful_batch();
-        index_scheduler.assert_internally_consistent();
 
         // the document with the id 3 should have its original embedding updated
         let rtxn = index.read_txn().unwrap();
@@ -5481,4 +5479,166 @@ mod tests {
 
         assert!(!embedding.is_empty());
     }
+
+    #[test]
+    fn delete_document_containing_vector() {
+        // 1. Add an embedder
+        // 2. Push two documents containing a simple vector
+        // 3. Delete the first document
+        // 4. The user defined roaring bitmap shouldn't contains the id of the first document anymore
+        // 5. Clear the index
+        // 6. The user defined roaring bitmap shouldn't contains the id of the second document
+        let (index_scheduler, mut handle) = IndexScheduler::test(true, vec![]);
+
+        let setting = meilisearch_types::settings::Settings::<Unchecked> {
+            embedders: Setting::Set(maplit::btreemap! {
+                S("manual") => Setting::Set(EmbeddingSettings {
+                    source: Setting::Set(milli::vector::settings::EmbedderSource::UserProvided),
+                    dimensions: Setting::Set(3),
+                    ..Default::default()
+                })
+            }),
+            ..Default::default()
+        };
+        index_scheduler
+            .register(
+                KindWithContent::SettingsUpdate {
+                    index_uid: S("doggos"),
+                    new_settings: Box::new(setting),
+                    is_deletion: false,
+                    allow_index_creation: true,
+                },
+                None,
+                false,
+            )
+            .unwrap();
+        handle.advance_one_successful_batch();
+
+        let content = serde_json::json!(
+            [
+                {
+                    "id": 0,
+                    "doggo": "kefir",
+                    "_vectors": {
+                        "manual": vec![0, 0, 0],
+                    }
+                },
+                {
+                    "id": 1,
+                    "doggo": "intel",
+                    "_vectors": {
+                        "manual": vec![1, 1, 1],
+                    }
+                },
+            ]
+        );
+
+        let (uuid, mut file) = index_scheduler.create_update_file_with_uuid(0_u128).unwrap();
+        let documents_count =
+            read_json(serde_json::to_string_pretty(&content).unwrap().as_bytes(), &mut file)
+                .unwrap();
+        snapshot!(documents_count, @"2");
+        file.persist().unwrap();
+
+        index_scheduler
+            .register(
+                KindWithContent::DocumentAdditionOrUpdate {
+                    index_uid: S("doggos"),
+                    primary_key: None,
+                    method: ReplaceDocuments,
+                    content_file: uuid,
+                    documents_count,
+                    allow_index_creation: false,
+                },
+                None,
+                false,
+            )
+            .unwrap();
+        handle.advance_one_successful_batch();
+
+        index_scheduler
+            .register(
+                KindWithContent::DocumentDeletion {
+                    index_uid: S("doggos"),
+                    documents_ids: vec![S("1")],
+                },
+                None,
+                false,
+            )
+            .unwrap();
+        handle.advance_one_successful_batch();
+
+        let index = index_scheduler.index("doggos").unwrap();
+        let rtxn = index.read_txn().unwrap();
+        let field_ids_map = index.fields_ids_map(&rtxn).unwrap();
+        let field_ids = field_ids_map.ids().collect::<Vec<_>>();
+        let documents = index
+            .all_documents(&rtxn)
+            .unwrap()
+            .map(|ret| obkv_to_json(&field_ids, &field_ids_map, ret.unwrap().1).unwrap())
+            .collect::<Vec<_>>();
+        snapshot!(serde_json::to_string(&documents).unwrap(), @r###"[{"id":0,"doggo":"kefir"}]"###);
+        let conf = index.embedding_configs(&rtxn).unwrap();
+        // TODO: Here the user provided vectors should NOT contains 1
+        snapshot!(format!("{conf:#?}"), @r###"
+        [
+            IndexEmbeddingConfig {
+                name: "manual",
+                config: EmbeddingConfig {
+                    embedder_options: UserProvided(
+                        EmbedderOptions {
+                            dimensions: 3,
+                            distribution: None,
+                        },
+                    ),
+                    prompt: PromptData {
+                        template: "{% for field in fields %} {{ field.name }}: {{ field.value }}\n{% endfor %}",
+                    },
+                },
+                user_provided: RoaringBitmap<[0, 1]>,
+            },
+        ]
+        "###);
+        let docid = index.external_documents_ids.get(&rtxn, "0").unwrap().unwrap();
+        let embeddings = index.embeddings(&rtxn, docid).unwrap();
+        let embedding = &embeddings["manual"];
+        assert!(!embedding.is_empty(), "{embedding:?}");
+
+        index_scheduler
+            .register(KindWithContent::DocumentClear { index_uid: S("doggos") }, None, false)
+            .unwrap();
+        handle.advance_one_successful_batch();
+
+        let index = index_scheduler.index("doggos").unwrap();
+        let rtxn = index.read_txn().unwrap();
+        let field_ids_map = index.fields_ids_map(&rtxn).unwrap();
+        let field_ids = field_ids_map.ids().collect::<Vec<_>>();
+        let documents = index
+            .all_documents(&rtxn)
+            .unwrap()
+            .map(|ret| obkv_to_json(&field_ids, &field_ids_map, ret.unwrap().1).unwrap())
+            .collect::<Vec<_>>();
+        snapshot!(serde_json::to_string(&documents).unwrap(), @"[]");
+        let conf = index.embedding_configs(&rtxn).unwrap();
+        // TODO: Here the user provided vectors should contains nothing
+        snapshot!(format!("{conf:#?}"), @r###"
+        [
+            IndexEmbeddingConfig {
+                name: "manual",
+                config: EmbeddingConfig {
+                    embedder_options: UserProvided(
+                        EmbedderOptions {
+                            dimensions: 3,
+                            distribution: None,
+                        },
+                    ),
+                    prompt: PromptData {
+                        template: "{% for field in fields %} {{ field.name }}: {{ field.value }}\n{% endfor %}",
+                    },
+                },
+                user_provided: RoaringBitmap<[0, 1]>,
+            },
+        ]
+        "###);
+    }
 }
diff --git a/meilisearch/tests/vector/mod.rs b/meilisearch/tests/vector/mod.rs
index b4350116f..55dc186d5 100644
--- a/meilisearch/tests/vector/mod.rs
+++ b/meilisearch/tests/vector/mod.rs
@@ -1,5 +1,8 @@
+mod settings;
+
 use meili_snap::{json_string, snapshot};
 
+use crate::common::index::Index;
 use crate::common::{GetAllDocumentsOptions, Server};
 use crate::json;
 
@@ -147,3 +150,78 @@ async fn add_remove_user_provided() {
     }
     "###);
 }
+
+async fn generate_default_user_provided_documents(server: &Server) -> Index {
+    let index = server.index("doggo");
+    let (value, code) = server.set_features(json!({"vectorStore": true})).await;
+    snapshot!(code, @"200 OK");
+    snapshot!(value, @r###"
+    {
+      "vectorStore": true,
+      "metrics": false,
+      "logsRoute": false
+    }
+    "###);
+
+    let (response, code) = index
+        .update_settings(json!({
+          "embedders": {
+              "manual": {
+                  "source": "userProvided",
+                  "dimensions": 3,
+              }
+          },
+        }))
+        .await;
+    snapshot!(code, @"202 Accepted");
+    server.wait_task(response.uid()).await;
+
+    let documents = json!([
+      {"id": 0, "name": "kefir", "_vectors": { "manual": [0, 0, 0] }},
+      {"id": 1, "name": "echo", "_vectors": { "manual": [1, 1, 1] }},
+      {"id": 2, "name": "billou", "_vectors": { "manual": [[2, 2, 2], [2, 2, 3]] }},
+      {"id": 3, "name": "intel", "_vectors": { "manual": { "userProvided": true, "embeddings": [3, 3, 3] }}},
+      {"id": 4, "name": "max", "_vectors": { "manual": { "userProvided": true, "embeddings": [[4, 4, 4], [4, 4, 5]] }}},
+    ]);
+    let (value, code) = index.add_documents(documents, None).await;
+    snapshot!(code, @"202 Accepted");
+    index.wait_task(value.uid()).await;
+
+    index
+}
+
+#[actix_rt::test]
+async fn clear_documents() {
+    let server = Server::new().await;
+    let index = generate_default_user_provided_documents(&server).await;
+
+    let (value, _code) = index.clear_all_documents().await;
+    index.wait_task(value.uid()).await;
+
+    // Make sure the documents DB has been cleared
+    let (documents, _code) = index
+        .get_all_documents(GetAllDocumentsOptions { retrieve_vectors: true, ..Default::default() })
+        .await;
+    snapshot!(json_string!(documents), @r###"
+    {
+      "results": [],
+      "offset": 0,
+      "limit": 20,
+      "total": 0
+    }
+    "###);
+
+    // Make sure the arroy DB has been cleared
+    let (documents, _code) = index.search_post(json!({ "vector": [1, 1, 1] })).await;
+    snapshot!(json_string!(documents), @r###"
+    {
+      "hits": [],
+      "query": "",
+      "processingTimeMs": 0,
+      "limit": 20,
+      "offset": 0,
+      "estimatedTotalHits": 0,
+      "semanticHitCount": 0
+    }
+    "###);
+}
diff --git a/meilisearch/tests/vector/settings.rs b/meilisearch/tests/vector/settings.rs
new file mode 100644
index 000000000..6b93f001e
--- /dev/null
+++ b/meilisearch/tests/vector/settings.rs
@@ -0,0 +1,161 @@
+use meili_snap::{json_string, snapshot};
+
+use crate::common::{GetAllDocumentsOptions, Server};
+use crate::json;
+use crate::vector::generate_default_user_provided_documents;
+
+#[actix_rt::test]
+async fn update_embedder() {
+    let server = Server::new().await;
+    let index = server.index("doggo");
+    let (value, code) = server.set_features(json!({"vectorStore": true})).await;
+    snapshot!(code, @"200 OK");
+    snapshot!(value, @r###"
+    {
+      "vectorStore": true,
+      "metrics": false,
+      "logsRoute": false
+    }
+    "###);
+
+    let (response, code) = index
+        .update_settings(json!({
+          "embedders": { "manual": {}},
+        }))
+        .await;
+    snapshot!(code, @"202 Accepted");
+    server.wait_task(response.uid()).await;
+
+    let (response, code) = index
+        .update_settings(json!({
+          "embedders": {
+              "manual": {
+                  "source": "userProvided",
+                  "dimensions": 2,
+              }
+          },
+        }))
+        .await;
+    snapshot!(code, @"202 Accepted");
+
+    let ret = server.wait_task(response.uid()).await;
+    snapshot!(ret, @r###"
+    {
+      "uid": 1,
+      "indexUid": "doggo",
+      "status": "failed",
+      "type": "settingsUpdate",
+      "canceledBy": null,
+      "details": {
+        "embedders": {
+          "manual": {
+            "source": "userProvided",
+            "dimensions": 2
+          }
+        }
+      },
+      "error": {
+        "message": "`.embedders.manual`: Field `model` unavailable for source `userProvided` (only available for sources: `huggingFace`, `openAi`, `ollama`). Available fields: `source`, `dimensions`, `distribution`",
+        "code": "invalid_settings_embedders",
+        "type": "invalid_request",
+        "link": "https://docs.meilisearch.com/errors#invalid_settings_embedders"
+      },
+      "duration": "[duration]",
+      "enqueuedAt": "[date]",
+      "startedAt": "[date]",
+      "finishedAt": "[date]"
+    }
+    "###);
+}
+
+#[actix_rt::test]
+async fn reset_embedder_documents() {
+    let server = Server::new().await;
+    let index = generate_default_user_provided_documents(&server).await;
+
+    let (response, code) = index.delete_settings().await;
+    snapshot!(code, @"202 Accepted");
+    server.wait_task(response.uid()).await;
+
+    // Make sure the documents are still present
+    let (documents, _code) = index.get_all_documents(Default::default()).await;
+    snapshot!(json_string!(documents), @r###"
+    {
+      "results": [
+        {
+          "id": 0,
+          "name": "kefir"
+        },
+        {
+          "id": 1,
+          "name": "echo"
+        },
+        {
+          "id": 2,
+          "name": "billou"
+        },
+        {
+          "id": 3,
+          "name": "intel"
+        },
+        {
+          "id": 4,
+          "name": "max"
+        }
+      ],
+      "offset": 0,
+      "limit": 20,
+      "total": 5
+    }
+    "###);
+
+    // Make sure we are still able to retrieve their vectors
+    let (documents, _code) = index
+        .get_all_documents(GetAllDocumentsOptions { retrieve_vectors: true, ..Default::default() })
+        .await;
+    snapshot!(json_string!(documents), @r###"
+    {
+      "results": [
+        {
+          "id": 0,
+          "name": "kefir",
+          "_vectors": {}
+        },
+        {
+          "id": 1,
+          "name": "echo",
+          "_vectors": {}
+        },
+        {
+          "id": 2,
+          "name": "billou",
+          "_vectors": {}
+        },
+        {
+          "id": 3,
+          "name": "intel",
+          "_vectors": {}
+        },
+        {
+          "id": 4,
+          "name": "max",
+          "_vectors": {}
+        }
+      ],
+      "offset": 0,
+      "limit": 20,
+      "total": 5
+    }
+    "###);
+
+    // Make sure the arroy DB has been cleared
+    let (documents, _code) = index.search_post(json!({ "vector": [1, 1, 1] })).await;
+    snapshot!(json_string!(documents), @r###"
+    {
+      "message": "Cannot find embedder with name `default`.",
+      "code": "invalid_embedder",
+      "type": "invalid_request",
+      "link": "https://docs.meilisearch.com/errors#invalid_embedder"
+    }
+    "###);
+}