meilisearch/src/update/index_documents/mod.rs

479 lines
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Rust
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use std::borrow::Cow;
use std::fs::File;
use std::io::{self, Seek, SeekFrom};
use std::sync::mpsc::sync_channel;
use std::time::Instant;
use anyhow::Context;
use bstr::ByteSlice as _;
use grenad::{Writer, Sorter, Merger, Reader, FileFuse, CompressionType};
use heed::types::ByteSlice;
use log::{debug, info, error};
use rayon::prelude::*;
use crate::index::Index;
use self::store::Store;
use self::merge_function::{
main_merge, word_docids_merge, words_pairs_proximities_docids_merge,
docid_word_positions_merge, documents_merge,
};
pub use self::transform::{Transform, TransformOutput};
use super::UpdateBuilder;
mod merge_function;
mod store;
mod transform;
#[derive(Debug, Copy, Clone)]
enum WriteMethod {
Append,
GetMergePut,
}
type MergeFn = for<'a> fn(&[u8], &[Cow<'a, [u8]>]) -> anyhow::Result<Vec<u8>>;
fn create_writer(typ: CompressionType, level: Option<u32>, file: File) -> io::Result<Writer<File>> {
let mut builder = Writer::builder();
builder.compression_type(typ);
if let Some(level) = level {
builder.compression_level(level);
}
builder.build(file)
}
fn create_sorter(
merge: MergeFn,
chunk_compression_type: CompressionType,
chunk_compression_level: Option<u32>,
chunk_fusing_shrink_size: Option<u64>,
max_nb_chunks: Option<usize>,
max_memory: Option<usize>,
) -> Sorter<MergeFn>
{
let mut builder = Sorter::builder(merge);
if let Some(shrink_size) = chunk_fusing_shrink_size {
builder.file_fusing_shrink_size(shrink_size);
}
builder.chunk_compression_type(chunk_compression_type);
if let Some(level) = chunk_compression_level {
builder.chunk_compression_level(level);
}
if let Some(nb_chunks) = max_nb_chunks {
builder.max_nb_chunks(nb_chunks);
}
if let Some(memory) = max_memory {
builder.max_memory(memory);
}
builder.build()
}
fn writer_into_reader(writer: Writer<File>, shrink_size: Option<u64>) -> anyhow::Result<Reader<FileFuse>> {
let mut file = writer.into_inner()?;
file.seek(SeekFrom::Start(0))?;
let file = if let Some(shrink_size) = shrink_size {
FileFuse::builder().shrink_size(shrink_size).build(file)
} else {
FileFuse::new(file)
};
Reader::new(file).map_err(Into::into)
}
fn merge_readers(sources: Vec<Reader<FileFuse>>, merge: MergeFn) -> Merger<FileFuse, MergeFn> {
let mut builder = Merger::builder(merge);
builder.extend(sources);
builder.build()
}
fn merge_into_lmdb_database(
wtxn: &mut heed::RwTxn,
database: heed::PolyDatabase,
sources: Vec<Reader<FileFuse>>,
merge: MergeFn,
method: WriteMethod,
) -> anyhow::Result<()> {
debug!("Merging {} MTBL stores...", sources.len());
let before = Instant::now();
let merger = merge_readers(sources, merge);
let mut in_iter = merger.into_merge_iter()?;
match method {
WriteMethod::Append => {
let mut out_iter = database.iter_mut::<_, ByteSlice, ByteSlice>(wtxn)?;
while let Some((k, v)) = in_iter.next()? {
out_iter.append(k, v).with_context(|| {
format!("writing {:?} into LMDB", k.as_bstr())
})?;
}
},
WriteMethod::GetMergePut => {
while let Some((k, v)) = in_iter.next()? {
match database.get::<_, ByteSlice, ByteSlice>(wtxn, k)? {
Some(old_val) => {
let vals = vec![Cow::Borrowed(old_val), Cow::Borrowed(v)];
let val = merge(k, &vals).expect("merge failed");
database.put::<_, ByteSlice, ByteSlice>(wtxn, k, &val)?
},
None => database.put::<_, ByteSlice, ByteSlice>(wtxn, k, v)?,
}
}
},
}
debug!("MTBL stores merged in {:.02?}!", before.elapsed());
Ok(())
}
fn write_into_lmdb_database(
wtxn: &mut heed::RwTxn,
database: heed::PolyDatabase,
mut reader: Reader<FileFuse>,
merge: MergeFn,
method: WriteMethod,
) -> anyhow::Result<()> {
debug!("Writing MTBL stores...");
let before = Instant::now();
match method {
WriteMethod::Append => {
let mut out_iter = database.iter_mut::<_, ByteSlice, ByteSlice>(wtxn)?;
while let Some((k, v)) = reader.next()? {
out_iter.append(k, v).with_context(|| {
format!("writing {:?} into LMDB", k.as_bstr())
})?;
}
},
WriteMethod::GetMergePut => {
while let Some((k, v)) = reader.next()? {
match database.get::<_, ByteSlice, ByteSlice>(wtxn, k)? {
Some(old_val) => {
let vals = vec![Cow::Borrowed(old_val), Cow::Borrowed(v)];
let val = merge(k, &vals).expect("merge failed");
database.put::<_, ByteSlice, ByteSlice>(wtxn, k, &val)?
},
None => database.put::<_, ByteSlice, ByteSlice>(wtxn, k, v)?,
}
}
}
}
debug!("MTBL stores merged in {:.02?}!", before.elapsed());
Ok(())
}
#[derive(Debug, Clone, Copy, PartialEq, Eq, Hash)]
pub enum IndexDocumentsMethod {
/// Replace the previous document with the new one,
/// removing all the already known attributes.
ReplaceDocuments,
/// Merge the previous version of the document with the new version,
/// replacing old attributes values with the new ones and add the new attributes.
UpdateDocuments,
}
pub struct IndexDocuments<'t, 'u, 'i> {
wtxn: &'t mut heed::RwTxn<'u>,
index: &'i Index,
log_every_n: Option<usize>,
max_nb_chunks: Option<usize>,
max_memory: Option<usize>,
linked_hash_map_size: Option<usize>,
chunk_compression_type: CompressionType,
chunk_compression_level: Option<u32>,
chunk_fusing_shrink_size: Option<u64>,
indexing_jobs: Option<usize>,
update_method: IndexDocumentsMethod,
}
impl<'t, 'u, 'i> IndexDocuments<'t, 'u, 'i> {
pub fn new(wtxn: &'t mut heed::RwTxn<'u>, index: &'i Index) -> IndexDocuments<'t, 'u, 'i> {
IndexDocuments {
wtxn,
index,
log_every_n: None,
max_nb_chunks: None,
max_memory: None,
linked_hash_map_size: None,
chunk_compression_type: CompressionType::None,
chunk_compression_level: None,
chunk_fusing_shrink_size: None,
indexing_jobs: None,
update_method: IndexDocumentsMethod::ReplaceDocuments
}
}
pub(crate) fn log_every_n(&mut self, log_every_n: usize) -> &mut Self {
self.log_every_n = Some(log_every_n);
self
}
pub(crate) fn max_nb_chunks(&mut self, max_nb_chunks: usize) -> &mut Self {
self.max_nb_chunks = Some(max_nb_chunks);
self
}
pub(crate) fn max_memory(&mut self, max_memory: usize) -> &mut Self {
self.max_memory = Some(max_memory);
self
}
pub(crate) fn linked_hash_map_size(&mut self, linked_hash_map_size: usize) -> &mut Self {
self.linked_hash_map_size = Some(linked_hash_map_size);
self
}
pub(crate) fn chunk_compression_type(&mut self, chunk_compression_type: CompressionType) -> &mut Self {
self.chunk_compression_type = chunk_compression_type;
self
}
pub(crate) fn chunk_compression_level(&mut self, chunk_compression_level: u32) -> &mut Self {
self.chunk_compression_level = Some(chunk_compression_level);
self
}
pub(crate) fn chunk_fusing_shrink_size(&mut self, chunk_fusing_shrink_size: u64) -> &mut Self {
self.chunk_fusing_shrink_size = Some(chunk_fusing_shrink_size);
self
}
pub(crate) fn indexing_jobs(&mut self, indexing_jobs: usize) -> &mut Self {
self.indexing_jobs = Some(indexing_jobs);
self
}
pub fn index_documents_method(&mut self, method: IndexDocumentsMethod) -> &mut Self {
self.update_method = method;
self
}
pub fn execute<R, F>(self, reader: R, progress_callback: F) -> anyhow::Result<()>
where
R: io::Read,
F: Fn(usize, usize) + Sync,
{
let before_indexing = Instant::now();
let transform = Transform {
rtxn: &self.wtxn,
index: self.index,
chunk_compression_type: self.chunk_compression_type,
chunk_compression_level: self.chunk_compression_level,
chunk_fusing_shrink_size: self.chunk_fusing_shrink_size,
max_nb_chunks: self.max_nb_chunks,
max_memory: self.max_memory,
index_documents_method: self.update_method,
};
let TransformOutput {
fields_ids_map,
users_ids_documents_ids,
new_documents_ids,
replaced_documents_ids,
documents_count,
documents_file,
} = transform.from_csv(reader)?;
// We delete the documents that this document addition replaces. This way we are
// able to simply insert all the documents even if they already exist in the database.
if !replaced_documents_ids.is_empty() {
let update_builder = UpdateBuilder {
log_every_n: self.log_every_n,
max_nb_chunks: self.max_nb_chunks,
max_memory: self.max_memory,
linked_hash_map_size: self.linked_hash_map_size,
chunk_compression_type: self.chunk_compression_type,
chunk_compression_level: self.chunk_compression_level,
chunk_fusing_shrink_size: self.chunk_fusing_shrink_size,
indexing_jobs: self.indexing_jobs,
};
let mut deletion_builder = update_builder.delete_documents(self.wtxn, self.index)?;
deletion_builder.delete_documents(&replaced_documents_ids);
let _deleted_documents_count = deletion_builder.execute()?;
}
let mmap = unsafe {
memmap::Mmap::map(&documents_file).context("mmaping the transform documents file")?
};
let documents = grenad::Reader::new(mmap.as_ref())?;
// The enum which indicates the type of the readers
// merges that are potentially done on different threads.
enum DatabaseType {
Main,
WordDocids,
WordsPairsProximitiesDocids,
}
let linked_hash_map_size = self.linked_hash_map_size;
let max_nb_chunks = self.max_nb_chunks;
let max_memory = self.max_memory;
let chunk_compression_type = self.chunk_compression_type;
let chunk_compression_level = self.chunk_compression_level;
let log_every_n = self.log_every_n;
let chunk_fusing_shrink_size = self.chunk_fusing_shrink_size;
let jobs = self.indexing_jobs.unwrap_or(0);
let pool = rayon::ThreadPoolBuilder::new().num_threads(jobs).build()?;
let (receiver, docid_word_positions_readers, documents_readers) = pool.install(|| {
let num_threads = rayon::current_num_threads();
let max_memory_by_job = max_memory.map(|mm| mm / num_threads);
let readers = rayon::iter::repeatn(documents, num_threads)
.enumerate()
.map(|(i, documents)| {
let store = Store::new(
linked_hash_map_size,
max_nb_chunks,
max_memory_by_job,
chunk_compression_type,
chunk_compression_level,
chunk_fusing_shrink_size,
)?;
store.index(
documents,
documents_count,
i,
num_threads,
log_every_n,
&progress_callback,
)
})
.collect::<Result<Vec<_>, _>>()?;
let mut main_readers = Vec::with_capacity(readers.len());
let mut word_docids_readers = Vec::with_capacity(readers.len());
let mut docid_word_positions_readers = Vec::with_capacity(readers.len());
let mut words_pairs_proximities_docids_readers = Vec::with_capacity(readers.len());
let mut documents_readers = Vec::with_capacity(readers.len());
readers.into_iter().for_each(|readers| {
main_readers.push(readers.main);
word_docids_readers.push(readers.word_docids);
docid_word_positions_readers.push(readers.docid_word_positions);
words_pairs_proximities_docids_readers.push(readers.words_pairs_proximities_docids);
documents_readers.push(readers.documents);
});
// This is the function that merge the readers
// by using the given merge function.
let merge_readers = move |readers, merge| {
let mut writer = tempfile::tempfile().and_then(|f| {
create_writer(chunk_compression_type, chunk_compression_level, f)
})?;
let merger = merge_readers(readers, merge);
merger.write_into(&mut writer)?;
writer_into_reader(writer, chunk_fusing_shrink_size)
};
// The enum and the channel which is used to transfert
// the readers merges potentially done on another thread.
let (sender, receiver) = sync_channel(3);
debug!("Merging the main, word docids and words pairs proximity docids in parallel...");
rayon::spawn(move || {
vec![
(DatabaseType::Main, main_readers, main_merge as MergeFn),
(DatabaseType::WordDocids, word_docids_readers, word_docids_merge),
(
DatabaseType::WordsPairsProximitiesDocids,
words_pairs_proximities_docids_readers,
words_pairs_proximities_docids_merge,
),
]
.into_par_iter()
.for_each(|(dbtype, readers, merge)| {
let result = merge_readers(readers, merge);
if let Err(e) = sender.send((dbtype, result)) {
error!("sender error: {}", e);
}
});
});
Ok((receiver, docid_word_positions_readers, documents_readers)) as anyhow::Result<_>
})?;
let mut documents_ids = self.index.documents_ids(self.wtxn)?;
let contains_documents = !documents_ids.is_empty();
let write_method = if contains_documents {
WriteMethod::GetMergePut
} else {
WriteMethod::Append
};
debug!("Writing using the write method: {:?}", write_method);
// We write the fields ids map into the main database
self.index.put_fields_ids_map(self.wtxn, &fields_ids_map)?;
// We write the users_ids_documents_ids into the main database.
self.index.put_users_ids_documents_ids(self.wtxn, &users_ids_documents_ids)?;
// We merge the new documents ids with the existing ones.
documents_ids.union_with(&new_documents_ids);
documents_ids.union_with(&replaced_documents_ids);
self.index.put_documents_ids(self.wtxn, &documents_ids)?;
debug!("Writing the docid word positions into LMDB on disk...");
merge_into_lmdb_database(
self.wtxn,
*self.index.docid_word_positions.as_polymorph(),
docid_word_positions_readers,
docid_word_positions_merge,
write_method
)?;
debug!("Writing the documents into LMDB on disk...");
merge_into_lmdb_database(
self.wtxn,
*self.index.documents.as_polymorph(),
documents_readers,
documents_merge,
write_method
)?;
for (db_type, result) in receiver {
let content = result?;
match db_type {
DatabaseType::Main => {
debug!("Writing the main elements into LMDB on disk...");
write_into_lmdb_database(
self.wtxn,
self.index.main,
content,
main_merge,
WriteMethod::GetMergePut,
)?;
},
DatabaseType::WordDocids => {
debug!("Writing the words docids into LMDB on disk...");
let db = *self.index.word_docids.as_polymorph();
write_into_lmdb_database(
self.wtxn,
db,
content,
word_docids_merge,
write_method,
)?;
},
DatabaseType::WordsPairsProximitiesDocids => {
debug!("Writing the words pairs proximities docids into LMDB on disk...");
let db = *self.index.word_pair_proximity_docids.as_polymorph();
write_into_lmdb_database(
self.wtxn,
db,
content,
words_pairs_proximities_docids_merge,
write_method,
)?;
},
}
}
info!("Update processed in {:.02?}", before_indexing.elapsed());
Ok(())
}
}