2020-08-17 21:15:37 +08:00
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use std::path::PathBuf;
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use std::{str, io};
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2020-08-23 16:52:47 +08:00
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use anyhow::Context;
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2020-08-17 21:15:37 +08:00
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use heed::EnvOpenOptions;
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use milli::Index;
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use structopt::StructOpt;
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2020-08-23 16:52:47 +08:00
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use Command::*;
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2020-08-17 21:15:37 +08:00
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#[cfg(target_os = "linux")]
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#[global_allocator]
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static ALLOC: jemallocator::Jemalloc = jemallocator::Jemalloc;
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#[derive(Debug, StructOpt)]
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#[structopt(name = "milli-info", about = "A stats crawler for milli.")]
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struct Opt {
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/// The database path where the database is located.
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/// It is created if it doesn't already exist.
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#[structopt(long = "db", parse(from_os_str))]
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database: PathBuf,
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/// The maximum size the database can take on disk. It is recommended to specify
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/// the whole disk space (value must be a multiple of a page size).
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#[structopt(long = "db-size", default_value = "107374182400")] // 100 GB
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database_size: usize,
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/// Verbose mode (-v, -vv, -vvv, etc.)
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#[structopt(short, long, parse(from_occurrences))]
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verbose: usize,
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#[structopt(subcommand)]
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command: Command,
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}
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#[derive(Debug, StructOpt)]
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enum Command {
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/// Outputs a CSV of the most frequent words of this index.
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///
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/// `word` are displayed and ordered by frequency.
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/// `document_frequency` defines the number of documents which contains the word.
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MostCommonWords {
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/// The maximum number of frequencies to return.
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#[structopt(default_value = "10")]
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limit: usize,
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2020-08-21 20:24:05 +08:00
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},
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2020-08-21 20:42:55 +08:00
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/// Outputs a CSV with the biggest entries of the database.
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2020-09-06 23:14:20 +08:00
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BiggestValues {
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2020-08-21 20:42:55 +08:00
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/// The maximum number of sizes to return.
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#[structopt(default_value = "10")]
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limit: usize,
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},
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2020-08-23 16:52:47 +08:00
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2020-09-08 04:36:35 +08:00
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/// Outputs a CSV with the documents ids where the given words appears.
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WordsDocids {
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/// Display the whole documents ids in details.
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#[structopt(long)]
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full_display: bool,
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/// The words to display the documents ids of.
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words: Vec<String>,
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},
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2020-09-07 20:56:48 +08:00
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/// Outputs the total size of all the docid-word-positions keys and values.
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TotalDocidWordPositionsSize,
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/// Outputs the average number of *different* words by document.
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AverageNumberOfWordsByDoc,
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2020-09-07 21:26:42 +08:00
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/// Outputs the average number of positions for each document words.
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2020-09-30 00:11:44 +08:00
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AverageNumberOfPositionsByWord,
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2020-09-30 00:32:48 +08:00
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/// Outputs the average number of documents for each words pair.
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AverageNumberOfDocumentByWordPairProximity,
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2020-09-07 21:26:42 +08:00
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2020-09-22 19:52:24 +08:00
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/// Outputs a CSV with the proximities for the two specidied words and
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/// the documents ids where these relations appears.
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///
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2020-09-22 20:49:22 +08:00
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/// `word1`, `word2` defines the word pair specified *in this specific order*.
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2020-09-22 19:52:24 +08:00
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/// `proximity` defines the proximity between the two specified words.
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/// `documents_ids` defines the documents ids where the relation appears.
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WordPairProximitiesDocids {
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/// Display the whole documents ids in details.
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#[structopt(long)]
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full_display: bool,
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/// First word of the word pair.
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word1: String,
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/// Second word of the word pair.
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word2: String,
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},
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2020-09-06 23:14:20 +08:00
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/// Outputs the words FST to disk.
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///
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/// One can use the FST binary helper to dissect and analyze it,
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/// you can install it using `cargo install fst-bin`.
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ExportWordsFst {
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/// The path where the FST will be written.
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#[structopt(short, long, default_value = "words.fst")]
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output: PathBuf,
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2020-08-30 00:12:31 +08:00
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},
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2020-08-17 21:15:37 +08:00
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}
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fn main() -> anyhow::Result<()> {
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let opt = Opt::from_args();
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stderrlog::new()
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.verbosity(opt.verbose)
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.show_level(false)
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.timestamp(stderrlog::Timestamp::Off)
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.init()?;
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let env = EnvOpenOptions::new()
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.map_size(opt.database_size)
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.max_dbs(10)
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.open(&opt.database)?;
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// Open the LMDB database.
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2020-08-28 21:38:05 +08:00
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let index = Index::new(&env)?;
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2020-08-17 21:15:37 +08:00
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let rtxn = env.read_txn()?;
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match opt.command {
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2020-08-23 16:52:47 +08:00
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MostCommonWords { limit } => most_common_words(&index, &rtxn, limit),
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2020-09-06 23:14:20 +08:00
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BiggestValues { limit } => biggest_value_sizes(&index, &rtxn, limit),
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2020-09-08 04:36:35 +08:00
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WordsDocids { full_display, words } => words_docids(&index, &rtxn, !full_display, words),
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2020-09-07 20:56:48 +08:00
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TotalDocidWordPositionsSize => total_docid_word_positions_size(&index, &rtxn),
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AverageNumberOfWordsByDoc => average_number_of_words_by_doc(&index, &rtxn),
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2020-09-30 00:11:44 +08:00
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AverageNumberOfPositionsByWord => {
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average_number_of_positions_by_word(&index, &rtxn)
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},
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2020-09-30 00:32:48 +08:00
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AverageNumberOfDocumentByWordPairProximity => {
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average_number_of_document_by_word_pair_proximity(&index, &rtxn)
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}
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2020-09-22 19:52:24 +08:00
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WordPairProximitiesDocids { full_display, word1, word2 } => {
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word_pair_proximities_docids(&index, &rtxn, !full_display, word1, word2)
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},
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2020-09-06 23:14:20 +08:00
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ExportWordsFst { output } => export_words_fst(&index, &rtxn, output),
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2020-08-17 21:15:37 +08:00
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}
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}
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fn most_common_words(index: &Index, rtxn: &heed::RoTxn, limit: usize) -> anyhow::Result<()> {
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use std::collections::BinaryHeap;
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use std::cmp::Reverse;
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let mut heap = BinaryHeap::with_capacity(limit + 1);
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2020-09-06 23:14:20 +08:00
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for result in index.word_docids.iter(rtxn)? {
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2020-08-17 21:15:37 +08:00
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if limit == 0 { break }
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2020-09-06 23:14:20 +08:00
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let (word, docids) = result?;
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heap.push((Reverse(docids.len()), word));
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2020-08-17 21:15:37 +08:00
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if heap.len() > limit { heap.pop(); }
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}
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let stdout = io::stdout();
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let mut wtr = csv::Writer::from_writer(stdout.lock());
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2020-09-06 23:14:20 +08:00
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wtr.write_record(&["word", "document_frequency"])?;
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2020-08-17 21:15:37 +08:00
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2020-09-06 23:14:20 +08:00
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for (Reverse(document_frequency), word) in heap.into_sorted_vec() {
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wtr.write_record(&[word, &document_frequency.to_string()])?;
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2020-08-21 20:24:05 +08:00
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}
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Ok(wtr.flush()?)
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}
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2020-08-21 20:42:55 +08:00
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fn biggest_value_sizes(index: &Index, rtxn: &heed::RoTxn, limit: usize) -> anyhow::Result<()> {
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use std::cmp::Reverse;
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use std::collections::BinaryHeap;
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use heed::types::{Str, ByteSlice};
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2020-09-06 23:14:20 +08:00
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use milli::heed_codec::BEU32StrCodec;
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2020-08-21 20:42:55 +08:00
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2020-08-26 20:36:22 +08:00
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let main_name = "main";
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2020-09-06 23:14:20 +08:00
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let word_docids_name = "word_docids";
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let docid_word_positions_name = "docid_word_positions";
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2020-08-21 20:42:55 +08:00
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let mut heap = BinaryHeap::with_capacity(limit + 1);
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if limit > 0 {
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2020-08-26 20:36:22 +08:00
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if let Some(fst) = index.fst(rtxn)? {
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heap.push(Reverse((fst.as_fst().as_bytes().len(), format!("words-fst"), main_name)));
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if heap.len() > limit { heap.pop(); }
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}
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2020-08-30 00:12:31 +08:00
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if let Some(documents) = index.main.get::<_, Str, ByteSlice>(rtxn, "documents")? {
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2020-08-28 21:38:05 +08:00
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heap.push(Reverse((documents.len(), format!("documents"), main_name)));
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if heap.len() > limit { heap.pop(); }
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}
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2020-08-30 00:12:31 +08:00
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if let Some(documents_ids) = index.main.get::<_, Str, ByteSlice>(rtxn, "documents-ids")? {
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heap.push(Reverse((documents_ids.len(), format!("documents-ids"), main_name)));
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if heap.len() > limit { heap.pop(); }
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}
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2020-09-06 23:14:20 +08:00
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for result in index.word_docids.as_polymorph().iter::<_, Str, ByteSlice>(rtxn)? {
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2020-08-21 20:42:55 +08:00
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let (word, value) = result?;
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2020-09-06 23:14:20 +08:00
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heap.push(Reverse((value.len(), word.to_string(), word_docids_name)));
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2020-08-21 20:42:55 +08:00
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if heap.len() > limit { heap.pop(); }
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}
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2020-09-06 23:14:20 +08:00
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for result in index.docid_word_positions.as_polymorph().iter::<_, BEU32StrCodec, ByteSlice>(rtxn)? {
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let ((docid, word), value) = result?;
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let key = format!("{} {}", docid, word);
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heap.push(Reverse((value.len(), key, docid_word_positions_name)));
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2020-08-21 20:42:55 +08:00
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if heap.len() > limit { heap.pop(); }
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}
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}
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let stdout = io::stdout();
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let mut wtr = csv::Writer::from_writer(stdout.lock());
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2020-08-26 20:36:22 +08:00
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wtr.write_record(&["database_name", "key_name", "size"])?;
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2020-08-21 20:42:55 +08:00
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for Reverse((size, key_name, database_name)) in heap.into_sorted_vec() {
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wtr.write_record(&[database_name.to_string(), key_name, size.to_string()])?;
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}
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Ok(wtr.flush()?)
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2020-08-23 16:52:47 +08:00
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}
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2020-09-08 04:36:35 +08:00
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fn words_docids(index: &Index, rtxn: &heed::RoTxn, debug: bool, words: Vec<String>) -> anyhow::Result<()> {
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let stdout = io::stdout();
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let mut wtr = csv::Writer::from_writer(stdout.lock());
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wtr.write_record(&["word", "documents_ids"])?;
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for word in words {
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if let Some(docids) = index.word_docids.get(rtxn, &word)? {
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let docids = if debug {
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format!("{:?}", docids)
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} else {
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format!("{:?}", docids.iter().collect::<Vec<_>>())
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};
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wtr.write_record(&[word, docids])?;
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}
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}
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Ok(wtr.flush()?)
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}
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2020-09-06 23:14:20 +08:00
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fn export_words_fst(index: &Index, rtxn: &heed::RoTxn, output: PathBuf) -> anyhow::Result<()> {
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use std::fs::File;
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use std::io::Write as _;
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2020-08-23 16:52:47 +08:00
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2020-09-06 23:14:20 +08:00
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let mut output = File::create(&output)
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.with_context(|| format!("failed to create {} file", output.display()))?;
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2020-08-23 16:52:47 +08:00
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2020-09-06 23:14:20 +08:00
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match index.fst(rtxn)? {
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Some(fst) => output.write_all(fst.as_fst().as_bytes())?,
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None => {
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let fst = fst::Set::default();
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output.write_all(fst.as_fst().as_bytes())?;
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},
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2020-08-23 16:52:47 +08:00
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}
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2020-09-06 23:14:20 +08:00
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Ok(())
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2020-08-21 20:42:55 +08:00
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}
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2020-09-07 20:56:48 +08:00
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fn total_docid_word_positions_size(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
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use heed::types::ByteSlice;
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let mut total_key_size = 0;
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let mut total_val_size = 0;
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let mut count = 0;
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let iter = index.docid_word_positions.as_polymorph().iter::<_, ByteSlice, ByteSlice>(rtxn)?;
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for result in iter {
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let (key, val) = result?;
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total_key_size += key.len();
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total_val_size += val.len();
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count += 1;
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}
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println!("number of keys: {}", count);
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println!("total key size: {}", total_key_size);
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println!("total value size: {}", total_val_size);
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Ok(())
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}
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fn average_number_of_words_by_doc(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
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use heed::types::DecodeIgnore;
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use milli::{DocumentId, BEU32StrCodec};
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let mut words_counts = Vec::new();
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let mut count = 0;
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let mut prev = None as Option<(DocumentId, u32)>;
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let iter = index.docid_word_positions.as_polymorph().iter::<_, BEU32StrCodec, DecodeIgnore>(rtxn)?;
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for result in iter {
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let ((docid, _word), ()) = result?;
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match prev.as_mut() {
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Some((prev_docid, prev_count)) if docid == *prev_docid => {
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*prev_count += 1;
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},
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Some((prev_docid, prev_count)) => {
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words_counts.push(*prev_count);
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*prev_docid = docid;
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*prev_count = 0;
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count += 1;
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},
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None => prev = Some((docid, 1)),
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}
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}
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if let Some((_, prev_count)) = prev.take() {
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words_counts.push(prev_count);
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count += 1;
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}
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let words_count = words_counts.into_iter().map(|c| c as usize).sum::<usize>() as f64;
|
|
|
|
let count = count as f64;
|
|
|
|
|
|
|
|
println!("average number of different words by document: {}", words_count / count);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2020-09-07 21:26:42 +08:00
|
|
|
|
2020-09-30 00:11:44 +08:00
|
|
|
fn average_number_of_positions_by_word(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
|
2020-09-07 21:26:42 +08:00
|
|
|
use heed::types::DecodeIgnore;
|
2020-09-07 21:42:20 +08:00
|
|
|
use milli::ByteorderXRoaringBitmapCodec;
|
2020-09-07 21:26:42 +08:00
|
|
|
|
|
|
|
let mut values_length = Vec::new();
|
|
|
|
let mut count = 0;
|
|
|
|
|
2020-09-07 21:42:20 +08:00
|
|
|
let db = index.docid_word_positions.as_polymorph();
|
|
|
|
for result in db.iter::<_, DecodeIgnore, ByteorderXRoaringBitmapCodec>(rtxn)? {
|
2020-09-07 21:26:42 +08:00
|
|
|
let ((), val) = result?;
|
|
|
|
values_length.push(val.len() as u32);
|
|
|
|
count += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
let values_length_sum = values_length.into_iter().map(|c| c as usize).sum::<usize>() as f64;
|
|
|
|
let count = count as f64;
|
|
|
|
|
|
|
|
println!("average number of positions by word: {}", values_length_sum / count);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2020-09-22 19:52:24 +08:00
|
|
|
|
2020-09-30 00:32:48 +08:00
|
|
|
fn average_number_of_document_by_word_pair_proximity(
|
|
|
|
index: &Index,
|
|
|
|
rtxn: &heed::RoTxn,
|
|
|
|
) -> anyhow::Result<()>
|
|
|
|
{
|
|
|
|
use heed::types::DecodeIgnore;
|
|
|
|
use milli::RoaringBitmapCodec;
|
|
|
|
|
|
|
|
let mut values_length = Vec::new();
|
|
|
|
let mut count = 0;
|
|
|
|
|
|
|
|
let db = index.word_pair_proximity_docids.as_polymorph();
|
|
|
|
for result in db.iter::<_, DecodeIgnore, RoaringBitmapCodec>(rtxn)? {
|
|
|
|
let ((), val) = result?;
|
|
|
|
values_length.push(val.len() as u32);
|
|
|
|
count += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
let values_length_sum = values_length.into_iter().map(|c| c as usize).sum::<usize>() as f64;
|
|
|
|
let count = count as f64;
|
|
|
|
|
|
|
|
println!("average number of documents by words pairs proximities: {}", values_length_sum / count);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
2020-09-22 19:52:24 +08:00
|
|
|
fn word_pair_proximities_docids(
|
|
|
|
index: &Index,
|
|
|
|
rtxn: &heed::RoTxn,
|
|
|
|
debug: bool,
|
|
|
|
word1: String,
|
|
|
|
word2: String,
|
|
|
|
) -> anyhow::Result<()>
|
|
|
|
{
|
|
|
|
use heed::types::ByteSlice;
|
|
|
|
use milli::RoaringBitmapCodec;
|
|
|
|
|
|
|
|
let stdout = io::stdout();
|
|
|
|
let mut wtr = csv::Writer::from_writer(stdout.lock());
|
|
|
|
wtr.write_record(&["word1", "word2", "proximity", "documents_ids"])?;
|
|
|
|
|
|
|
|
// Create the prefix key with only the pair of words.
|
2020-09-22 20:49:22 +08:00
|
|
|
let mut prefix = Vec::with_capacity(word1.len() + word2.len() + 1);
|
|
|
|
prefix.extend_from_slice(word1.as_bytes());
|
2020-09-22 19:52:24 +08:00
|
|
|
prefix.push(0);
|
2020-09-22 20:49:22 +08:00
|
|
|
prefix.extend_from_slice(word2.as_bytes());
|
2020-09-22 19:52:24 +08:00
|
|
|
|
|
|
|
let db = index.word_pair_proximity_docids.as_polymorph();
|
|
|
|
let iter = db.prefix_iter::<_, ByteSlice, RoaringBitmapCodec>(rtxn, &prefix)?;
|
|
|
|
for result in iter {
|
|
|
|
let (key, docids) = result?;
|
|
|
|
|
|
|
|
// Skip keys that are longer than the requested one,
|
|
|
|
// a longer key means that the second word is a prefix of the request word.
|
|
|
|
if key.len() != prefix.len() + 1 { continue; }
|
|
|
|
|
|
|
|
let proximity = key.last().unwrap();
|
|
|
|
let docids = if debug {
|
|
|
|
format!("{:?}", docids)
|
|
|
|
} else {
|
|
|
|
format!("{:?}", docids.iter().collect::<Vec<_>>())
|
|
|
|
};
|
2020-09-22 20:49:22 +08:00
|
|
|
wtr.write_record(&[&word1, &word2, &proximity.to_string(), &docids])?;
|
2020-09-22 19:52:24 +08:00
|
|
|
}
|
|
|
|
|
|
|
|
Ok(wtr.flush()?)
|
|
|
|
}
|