2020-08-17 21:15:37 +08:00
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use std::path::PathBuf;
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2020-11-19 23:39:59 +08:00
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use std::{str, io, fmt};
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2020-08-17 21:15:37 +08:00
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2020-08-23 16:52:47 +08:00
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use anyhow::Context;
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2020-08-17 21:15:37 +08:00
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use heed::EnvOpenOptions;
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use structopt::StructOpt;
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2020-11-18 23:29:07 +08:00
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use crate::Index;
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2020-08-17 21:15:37 +08:00
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2020-08-23 16:52:47 +08:00
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use Command::*;
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2020-10-02 22:46:05 +08:00
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const MAIN_DB_NAME: &str = "main";
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const WORD_DOCIDS_DB_NAME: &str = "word-docids";
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const DOCID_WORD_POSITIONS_DB_NAME: &str = "docid-word-positions";
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const WORD_PAIR_PROXIMITY_DOCIDS_DB_NAME: &str = "word-pair-proximity-docids";
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const DOCUMENTS_DB_NAME: &str = "documents";
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2020-11-23 01:21:22 +08:00
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const USERS_IDS_DOCUMENTS_IDS: &[u8] = b"users-ids-documents-ids";
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2020-10-02 22:46:05 +08:00
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2020-10-01 17:39:30 +08:00
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const ALL_DATABASE_NAMES: &[&str] = &[
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2020-10-02 22:46:05 +08:00
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MAIN_DB_NAME,
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WORD_DOCIDS_DB_NAME,
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DOCID_WORD_POSITIONS_DB_NAME,
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WORD_PAIR_PROXIMITY_DOCIDS_DB_NAME,
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DOCUMENTS_DB_NAME,
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];
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2020-10-01 17:39:30 +08:00
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const POSTINGS_DATABASE_NAMES: &[&str] = &[
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WORD_DOCIDS_DB_NAME,
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DOCID_WORD_POSITIONS_DB_NAME,
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WORD_PAIR_PROXIMITY_DOCIDS_DB_NAME,
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];
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2020-08-17 21:15:37 +08:00
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#[derive(Debug, StructOpt)]
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2020-10-19 19:44:17 +08:00
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/// A stats fetcher for milli.
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pub struct Opt {
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2020-08-17 21:15:37 +08:00
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/// The database path where the database is located.
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/// It is created if it doesn't already exist.
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#[structopt(long = "db", parse(from_os_str))]
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database: PathBuf,
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/// The maximum size the database can take on disk. It is recommended to specify
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/// the whole disk space (value must be a multiple of a page size).
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#[structopt(long = "db-size", default_value = "107374182400")] // 100 GB
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database_size: usize,
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/// Verbose mode (-v, -vv, -vvv, etc.)
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#[structopt(short, long, parse(from_occurrences))]
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verbose: usize,
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#[structopt(subcommand)]
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command: Command,
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}
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#[derive(Debug, StructOpt)]
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enum Command {
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/// Outputs a CSV of the most frequent words of this index.
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///
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/// `word` are displayed and ordered by frequency.
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/// `document_frequency` defines the number of documents which contains the word.
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MostCommonWords {
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/// The maximum number of frequencies to return.
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#[structopt(default_value = "10")]
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limit: usize,
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2020-08-21 20:24:05 +08:00
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},
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2020-08-21 20:42:55 +08:00
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/// Outputs a CSV with the biggest entries of the database.
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2020-09-06 23:14:20 +08:00
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BiggestValues {
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2020-08-21 20:42:55 +08:00
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/// The maximum number of sizes to return.
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#[structopt(default_value = "10")]
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limit: usize,
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},
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2020-08-23 16:52:47 +08:00
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2020-09-08 04:36:35 +08:00
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/// Outputs a CSV with the documents ids where the given words appears.
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WordsDocids {
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/// Display the whole documents ids in details.
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#[structopt(long)]
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full_display: bool,
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/// The words to display the documents ids of.
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words: Vec<String>,
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},
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2020-11-13 23:15:05 +08:00
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/// Outputs a CSV with the documents ids along with the facet values where it appears.
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FacetValuesDocids {
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/// Display the whole documents ids in details.
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#[structopt(long)]
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full_display: bool,
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/// The field name in the document.
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field_name: String,
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},
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2020-11-17 21:50:32 +08:00
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/// Outputs some facets statistics for the given facet name.
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FacetStats {
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/// The field name in the document.
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field_name: String,
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},
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2020-09-07 20:56:48 +08:00
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/// Outputs the total size of all the docid-word-positions keys and values.
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TotalDocidWordPositionsSize,
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/// Outputs the average number of *different* words by document.
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AverageNumberOfWordsByDoc,
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2020-09-07 21:26:42 +08:00
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/// Outputs the average number of positions for each document words.
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2020-09-30 00:11:44 +08:00
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AverageNumberOfPositionsByWord,
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2020-10-01 17:39:30 +08:00
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/// Outputs some statistics about the given database (e.g. median, quartiles,
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/// percentiles, minimum, maximum, averge, key size, value size).
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DatabaseStats {
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#[structopt(possible_values = POSTINGS_DATABASE_NAMES)]
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database: String,
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},
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2020-09-30 23:41:54 +08:00
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2020-10-02 22:46:05 +08:00
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/// Outputs the size in bytes of the specified database.
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SizeOfDatabase {
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2020-10-01 17:39:30 +08:00
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#[structopt(possible_values = ALL_DATABASE_NAMES)]
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2020-10-02 22:46:05 +08:00
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database: String,
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},
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2020-09-22 19:52:24 +08:00
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/// Outputs a CSV with the proximities for the two specidied words and
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/// the documents ids where these relations appears.
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///
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2020-09-22 20:49:22 +08:00
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/// `word1`, `word2` defines the word pair specified *in this specific order*.
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2020-09-22 19:52:24 +08:00
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/// `proximity` defines the proximity between the two specified words.
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/// `documents_ids` defines the documents ids where the relation appears.
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WordPairProximitiesDocids {
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/// Display the whole documents ids in details.
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#[structopt(long)]
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full_display: bool,
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/// First word of the word pair.
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word1: String,
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/// Second word of the word pair.
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word2: String,
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},
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2020-09-06 23:14:20 +08:00
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/// Outputs the words FST to disk.
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///
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/// One can use the FST binary helper to dissect and analyze it,
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/// you can install it using `cargo install fst-bin`.
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ExportWordsFst {
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/// The path where the FST will be written.
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#[structopt(short, long, default_value = "words.fst")]
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output: PathBuf,
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2020-08-30 00:12:31 +08:00
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},
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2020-11-23 01:21:22 +08:00
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/// A command that patches the old external ids
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/// into the new external ids format.
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PatchToNewExternalIds,
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2020-08-17 21:15:37 +08:00
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}
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2020-10-19 19:44:17 +08:00
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pub fn run(opt: Opt) -> anyhow::Result<()> {
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2020-08-17 21:15:37 +08:00
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stderrlog::new()
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.verbosity(opt.verbose)
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.show_level(false)
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.timestamp(stderrlog::Timestamp::Off)
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.init()?;
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2020-10-30 17:56:35 +08:00
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let mut options = EnvOpenOptions::new();
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options.map_size(opt.database_size);
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2020-08-17 21:15:37 +08:00
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// Open the LMDB database.
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2020-10-30 17:56:35 +08:00
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let index = Index::new(options, opt.database)?;
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let rtxn = index.read_txn()?;
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2020-08-17 21:15:37 +08:00
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match opt.command {
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2020-08-23 16:52:47 +08:00
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MostCommonWords { limit } => most_common_words(&index, &rtxn, limit),
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2020-09-06 23:14:20 +08:00
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BiggestValues { limit } => biggest_value_sizes(&index, &rtxn, limit),
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2020-09-08 04:36:35 +08:00
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WordsDocids { full_display, words } => words_docids(&index, &rtxn, !full_display, words),
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2020-11-13 23:15:05 +08:00
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FacetValuesDocids { full_display, field_name } => {
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facet_values_docids(&index, &rtxn, !full_display, field_name)
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},
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2020-11-17 21:50:32 +08:00
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FacetStats { field_name } => facet_stats(&index, &rtxn, field_name),
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2020-09-07 20:56:48 +08:00
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TotalDocidWordPositionsSize => total_docid_word_positions_size(&index, &rtxn),
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AverageNumberOfWordsByDoc => average_number_of_words_by_doc(&index, &rtxn),
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2020-09-30 00:11:44 +08:00
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AverageNumberOfPositionsByWord => {
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average_number_of_positions_by_word(&index, &rtxn)
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},
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2020-10-02 22:46:05 +08:00
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SizeOfDatabase { database } => size_of_database(&index, &rtxn, &database),
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2020-10-01 17:39:30 +08:00
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DatabaseStats { database } => database_stats(&index, &rtxn, &database),
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2020-09-22 19:52:24 +08:00
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WordPairProximitiesDocids { full_display, word1, word2 } => {
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word_pair_proximities_docids(&index, &rtxn, !full_display, word1, word2)
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},
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2020-09-06 23:14:20 +08:00
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ExportWordsFst { output } => export_words_fst(&index, &rtxn, output),
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2020-11-23 01:21:22 +08:00
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PatchToNewExternalIds => {
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drop(rtxn);
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let mut wtxn = index.write_txn()?;
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let result = patch_to_new_external_ids(&index, &mut wtxn);
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wtxn.commit()?;
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result
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}
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2020-08-17 21:15:37 +08:00
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}
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}
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2020-11-23 01:21:22 +08:00
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fn patch_to_new_external_ids(index: &Index, wtxn: &mut heed::RwTxn) -> anyhow::Result<()> {
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use heed::types::ByteSlice;
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if let Some(documents_ids) = index.main.get::<_, ByteSlice, ByteSlice>(wtxn, USERS_IDS_DOCUMENTS_IDS)? {
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let documents_ids = documents_ids.to_owned();
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index.main.put::<_, ByteSlice, ByteSlice>(
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wtxn,
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crate::index::HARD_EXTERNAL_DOCUMENTS_IDS_KEY.as_bytes(),
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&documents_ids,
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)?;
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index.main.delete::<_, ByteSlice>(wtxn, USERS_IDS_DOCUMENTS_IDS)?;
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}
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Ok(())
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}
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2020-08-17 21:15:37 +08:00
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fn most_common_words(index: &Index, rtxn: &heed::RoTxn, limit: usize) -> anyhow::Result<()> {
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use std::collections::BinaryHeap;
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use std::cmp::Reverse;
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let mut heap = BinaryHeap::with_capacity(limit + 1);
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2020-09-06 23:14:20 +08:00
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for result in index.word_docids.iter(rtxn)? {
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2020-08-17 21:15:37 +08:00
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if limit == 0 { break }
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2020-09-06 23:14:20 +08:00
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let (word, docids) = result?;
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heap.push((Reverse(docids.len()), word));
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2020-08-17 21:15:37 +08:00
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if heap.len() > limit { heap.pop(); }
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}
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let stdout = io::stdout();
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let mut wtr = csv::Writer::from_writer(stdout.lock());
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2020-09-06 23:14:20 +08:00
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wtr.write_record(&["word", "document_frequency"])?;
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2020-08-17 21:15:37 +08:00
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2020-09-06 23:14:20 +08:00
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for (Reverse(document_frequency), word) in heap.into_sorted_vec() {
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wtr.write_record(&[word, &document_frequency.to_string()])?;
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2020-08-21 20:24:05 +08:00
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}
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Ok(wtr.flush()?)
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}
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2020-08-21 20:42:55 +08:00
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2020-11-19 23:39:59 +08:00
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/// Helper function that converts the facet value key to a unique type
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/// that can be used to log or display purposes.
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fn facet_values_iter<'txn, DC: 'txn, T>(
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2020-11-18 23:29:07 +08:00
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rtxn: &'txn heed::RoTxn,
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db: heed::Database<heed::types::ByteSlice, DC>,
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field_id: u8,
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facet_type: crate::facet::FacetType,
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2020-11-19 23:39:59 +08:00
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string_fn: impl Fn(&str) -> T + 'txn,
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float_fn: impl Fn(u8, f64, f64) -> T + 'txn,
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integer_fn: impl Fn(u8, i64, i64) -> T + 'txn,
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) -> heed::Result<Box<dyn Iterator<Item=heed::Result<(T, DC::DItem)>> + 'txn>>
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2020-11-18 23:29:07 +08:00
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where
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DC: heed::BytesDecode<'txn>,
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{
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use crate::facet::FacetType;
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use crate::heed_codec::facet::{
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FacetValueStringCodec, FacetLevelValueF64Codec, FacetLevelValueI64Codec,
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};
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let iter = db.prefix_iter(&rtxn, &[field_id])?;
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match facet_type {
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FacetType::String => {
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let iter = iter.remap_key_type::<FacetValueStringCodec>()
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2020-11-19 23:39:59 +08:00
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.map(move |r| r.map(|((_, key), value)| (string_fn(key), value)));
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2020-11-18 23:29:07 +08:00
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Ok(Box::new(iter) as Box<dyn Iterator<Item=_>>)
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},
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FacetType::Float => {
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let iter = iter.remap_key_type::<FacetLevelValueF64Codec>()
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2020-11-19 23:39:59 +08:00
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.map(move |r| r.map(|((_, level, left, right), value)| {
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(float_fn(level, left, right), value)
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2020-11-18 23:29:07 +08:00
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}));
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Ok(Box::new(iter))
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},
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FacetType::Integer => {
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let iter = iter.remap_key_type::<FacetLevelValueI64Codec>()
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2020-11-19 23:39:59 +08:00
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.map(move |r| r.map(|((_, level, left, right), value)| {
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(integer_fn(level, left, right), value)
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2020-11-18 23:29:07 +08:00
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}));
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Ok(Box::new(iter))
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},
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}
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}
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2020-11-19 23:39:59 +08:00
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fn facet_number_value_to_string<T: fmt::Debug>(level: u8, left: T, right: T) -> String {
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if level == 0 {
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format!("{:?} (level {})", left, level)
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} else {
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format!("{:?} to {:?} (level {})", left, right, level)
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}
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}
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2020-08-21 20:42:55 +08:00
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fn biggest_value_sizes(index: &Index, rtxn: &heed::RoTxn, limit: usize) -> anyhow::Result<()> {
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use std::cmp::Reverse;
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use std::collections::BinaryHeap;
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use heed::types::{Str, ByteSlice};
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2020-11-15 18:58:19 +08:00
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let Index {
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env: _env,
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main,
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word_docids,
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docid_word_positions,
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word_pair_proximity_docids,
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|
|
facet_field_id_value_docids,
|
|
|
|
documents,
|
|
|
|
} = index;
|
2020-08-21 20:42:55 +08:00
|
|
|
|
2020-08-26 20:36:22 +08:00
|
|
|
let main_name = "main";
|
2020-09-06 23:14:20 +08:00
|
|
|
let word_docids_name = "word_docids";
|
|
|
|
let docid_word_positions_name = "docid_word_positions";
|
2020-11-15 18:58:19 +08:00
|
|
|
let word_pair_proximity_docids_name = "word_pair_proximity_docids";
|
|
|
|
let facet_field_id_value_docids_name = "facet_field_id_value_docids";
|
|
|
|
let documents_name = "documents";
|
2020-08-21 20:42:55 +08:00
|
|
|
|
|
|
|
let mut heap = BinaryHeap::with_capacity(limit + 1);
|
|
|
|
|
|
|
|
if limit > 0 {
|
2020-10-26 01:32:01 +08:00
|
|
|
let words_fst = index.words_fst(rtxn)?;
|
|
|
|
heap.push(Reverse((words_fst.as_fst().as_bytes().len(), format!("words-fst"), main_name)));
|
|
|
|
if heap.len() > limit { heap.pop(); }
|
2020-08-26 20:36:22 +08:00
|
|
|
|
2020-11-15 18:58:19 +08:00
|
|
|
if let Some(documents_ids) = main.get::<_, Str, ByteSlice>(rtxn, "documents-ids")? {
|
2020-08-30 00:12:31 +08:00
|
|
|
heap.push(Reverse((documents_ids.len(), format!("documents-ids"), main_name)));
|
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
|
|
|
|
2020-11-15 18:58:19 +08:00
|
|
|
for result in word_docids.remap_data_type::<ByteSlice>().iter(rtxn)? {
|
2020-08-21 20:42:55 +08:00
|
|
|
let (word, value) = result?;
|
2020-09-06 23:14:20 +08:00
|
|
|
heap.push(Reverse((value.len(), word.to_string(), word_docids_name)));
|
2020-08-21 20:42:55 +08:00
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
|
|
|
|
2020-11-15 18:58:19 +08:00
|
|
|
for result in docid_word_positions.remap_data_type::<ByteSlice>().iter(rtxn)? {
|
2020-09-06 23:14:20 +08:00
|
|
|
let ((docid, word), value) = result?;
|
|
|
|
let key = format!("{} {}", docid, word);
|
|
|
|
heap.push(Reverse((value.len(), key, docid_word_positions_name)));
|
2020-08-21 20:42:55 +08:00
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
2020-11-15 18:58:19 +08:00
|
|
|
|
|
|
|
for result in word_pair_proximity_docids.remap_data_type::<ByteSlice>().iter(rtxn)? {
|
|
|
|
let ((word1, word2, prox), value) = result?;
|
|
|
|
let key = format!("{} {} {}", word1, word2, prox);
|
|
|
|
heap.push(Reverse((value.len(), key, word_pair_proximity_docids_name)));
|
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
|
|
|
|
|
|
|
let faceted_fields = index.faceted_fields(rtxn)?;
|
|
|
|
let fields_ids_map = index.fields_ids_map(rtxn)?;
|
|
|
|
for (field_id, field_type) in faceted_fields {
|
|
|
|
let facet_name = fields_ids_map.name(field_id).unwrap();
|
2020-11-18 23:29:07 +08:00
|
|
|
|
|
|
|
let db = facet_field_id_value_docids.remap_data_type::<ByteSlice>();
|
2020-11-19 23:39:59 +08:00
|
|
|
let iter = facet_values_iter(
|
|
|
|
rtxn,
|
|
|
|
db,
|
|
|
|
field_id,
|
|
|
|
field_type,
|
|
|
|
|key| key.to_owned(),
|
|
|
|
facet_number_value_to_string,
|
|
|
|
facet_number_value_to_string,
|
|
|
|
)?;
|
|
|
|
|
|
|
|
for result in iter {
|
2020-11-15 18:58:19 +08:00
|
|
|
let (fvalue, value) = result?;
|
|
|
|
let key = format!("{} {}", facet_name, fvalue);
|
|
|
|
heap.push(Reverse((value.len(), key, facet_field_id_value_docids_name)));
|
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
for result in documents.remap_data_type::<ByteSlice>().iter(rtxn)? {
|
|
|
|
let (id, value) = result?;
|
|
|
|
heap.push(Reverse((value.len(), id.to_string(), documents_name)));
|
|
|
|
if heap.len() > limit { heap.pop(); }
|
|
|
|
}
|
2020-08-21 20:42:55 +08:00
|
|
|
}
|
|
|
|
|
|
|
|
let stdout = io::stdout();
|
|
|
|
let mut wtr = csv::Writer::from_writer(stdout.lock());
|
2020-08-26 20:36:22 +08:00
|
|
|
wtr.write_record(&["database_name", "key_name", "size"])?;
|
2020-08-21 20:42:55 +08:00
|
|
|
|
|
|
|
for Reverse((size, key_name, database_name)) in heap.into_sorted_vec() {
|
|
|
|
wtr.write_record(&[database_name.to_string(), key_name, size.to_string()])?;
|
|
|
|
}
|
|
|
|
|
|
|
|
Ok(wtr.flush()?)
|
2020-08-23 16:52:47 +08:00
|
|
|
}
|
|
|
|
|
2020-09-08 04:36:35 +08:00
|
|
|
fn words_docids(index: &Index, rtxn: &heed::RoTxn, debug: bool, words: Vec<String>) -> anyhow::Result<()> {
|
|
|
|
let stdout = io::stdout();
|
|
|
|
let mut wtr = csv::Writer::from_writer(stdout.lock());
|
|
|
|
wtr.write_record(&["word", "documents_ids"])?;
|
|
|
|
|
|
|
|
for word in words {
|
|
|
|
if let Some(docids) = index.word_docids.get(rtxn, &word)? {
|
|
|
|
let docids = if debug {
|
|
|
|
format!("{:?}", docids)
|
|
|
|
} else {
|
|
|
|
format!("{:?}", docids.iter().collect::<Vec<_>>())
|
|
|
|
};
|
|
|
|
wtr.write_record(&[word, docids])?;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
Ok(wtr.flush()?)
|
|
|
|
}
|
|
|
|
|
2020-11-13 23:15:05 +08:00
|
|
|
fn facet_values_docids(index: &Index, rtxn: &heed::RoTxn, debug: bool, field_name: String) -> anyhow::Result<()> {
|
|
|
|
let fields_ids_map = index.fields_ids_map(&rtxn)?;
|
|
|
|
let faceted_fields = index.faceted_fields(&rtxn)?;
|
|
|
|
|
|
|
|
let field_id = fields_ids_map.id(&field_name)
|
|
|
|
.with_context(|| format!("field {} not found", field_name))?;
|
|
|
|
let field_type = faceted_fields.get(&field_id)
|
|
|
|
.with_context(|| format!("field {} is not faceted", field_name))?;
|
|
|
|
|
|
|
|
let stdout = io::stdout();
|
|
|
|
let mut wtr = csv::Writer::from_writer(stdout.lock());
|
2020-11-20 19:09:21 +08:00
|
|
|
wtr.write_record(&["facet_value", "documents_count", "documents_ids"])?;
|
2020-11-13 23:15:05 +08:00
|
|
|
|
2020-11-18 23:29:07 +08:00
|
|
|
let db = index.facet_field_id_value_docids;
|
2020-11-19 23:39:59 +08:00
|
|
|
let iter = facet_values_iter(
|
|
|
|
rtxn,
|
|
|
|
db,
|
|
|
|
field_id,
|
|
|
|
*field_type,
|
|
|
|
|key| key.to_owned(),
|
|
|
|
facet_number_value_to_string,
|
|
|
|
facet_number_value_to_string,
|
|
|
|
)?;
|
|
|
|
|
|
|
|
for result in iter {
|
2020-11-13 23:15:05 +08:00
|
|
|
let (value, docids) = result?;
|
2020-11-20 19:09:21 +08:00
|
|
|
let count = docids.len();
|
2020-11-13 23:15:05 +08:00
|
|
|
let docids = if debug {
|
|
|
|
format!("{:?}", docids)
|
|
|
|
} else {
|
|
|
|
format!("{:?}", docids.iter().collect::<Vec<_>>())
|
|
|
|
};
|
2020-11-20 19:09:21 +08:00
|
|
|
wtr.write_record(&[value, count.to_string(), docids])?;
|
2020-11-13 23:15:05 +08:00
|
|
|
}
|
|
|
|
|
|
|
|
Ok(wtr.flush()?)
|
|
|
|
}
|
|
|
|
|
2020-11-17 21:50:32 +08:00
|
|
|
fn facet_stats(index: &Index, rtxn: &heed::RoTxn, field_name: String) -> anyhow::Result<()> {
|
|
|
|
let fields_ids_map = index.fields_ids_map(&rtxn)?;
|
|
|
|
let faceted_fields = index.faceted_fields(&rtxn)?;
|
|
|
|
|
|
|
|
let field_id = fields_ids_map.id(&field_name)
|
|
|
|
.with_context(|| format!("field {} not found", field_name))?;
|
|
|
|
let field_type = faceted_fields.get(&field_id)
|
|
|
|
.with_context(|| format!("field {} is not faceted", field_name))?;
|
|
|
|
|
2020-11-19 23:39:59 +08:00
|
|
|
let db = index.facet_field_id_value_docids;
|
|
|
|
let iter = facet_values_iter(
|
|
|
|
rtxn,
|
|
|
|
db,
|
|
|
|
field_id,
|
|
|
|
*field_type,
|
|
|
|
|_key| 0u8,
|
|
|
|
|level, _left, _right| level,
|
|
|
|
|level, _left, _right| level,
|
|
|
|
)?;
|
2020-11-17 21:50:32 +08:00
|
|
|
|
|
|
|
println!("The database {:?} facet stats", field_name);
|
|
|
|
|
|
|
|
let mut level_size = 0;
|
|
|
|
let mut current_level = None;
|
|
|
|
for result in iter {
|
2020-11-19 23:39:59 +08:00
|
|
|
let (level, _) = result?;
|
2020-11-17 21:50:32 +08:00
|
|
|
if let Some(current) = current_level {
|
|
|
|
if current != level {
|
|
|
|
println!("\tnumber of groups at level {}: {}", current, level_size);
|
|
|
|
level_size = 0;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
current_level = Some(level);
|
|
|
|
level_size += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
if let Some(current) = current_level {
|
|
|
|
println!("\tnumber of groups at level {}: {}", current, level_size);
|
|
|
|
}
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
2020-09-06 23:14:20 +08:00
|
|
|
fn export_words_fst(index: &Index, rtxn: &heed::RoTxn, output: PathBuf) -> anyhow::Result<()> {
|
|
|
|
use std::fs::File;
|
|
|
|
use std::io::Write as _;
|
2020-08-23 16:52:47 +08:00
|
|
|
|
2020-09-06 23:14:20 +08:00
|
|
|
let mut output = File::create(&output)
|
|
|
|
.with_context(|| format!("failed to create {} file", output.display()))?;
|
2020-08-23 16:52:47 +08:00
|
|
|
|
2020-10-26 01:32:01 +08:00
|
|
|
let words_fst = index.words_fst(rtxn)?;
|
|
|
|
output.write_all(words_fst.as_fst().as_bytes())?;
|
2020-08-23 16:52:47 +08:00
|
|
|
|
2020-09-06 23:14:20 +08:00
|
|
|
Ok(())
|
2020-08-21 20:42:55 +08:00
|
|
|
}
|
2020-09-07 20:56:48 +08:00
|
|
|
|
|
|
|
fn total_docid_word_positions_size(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
|
|
|
|
use heed::types::ByteSlice;
|
|
|
|
|
|
|
|
let mut total_key_size = 0;
|
|
|
|
let mut total_val_size = 0;
|
|
|
|
let mut count = 0;
|
|
|
|
|
|
|
|
let iter = index.docid_word_positions.as_polymorph().iter::<_, ByteSlice, ByteSlice>(rtxn)?;
|
|
|
|
for result in iter {
|
|
|
|
let (key, val) = result?;
|
|
|
|
total_key_size += key.len();
|
|
|
|
total_val_size += val.len();
|
|
|
|
count += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
println!("number of keys: {}", count);
|
|
|
|
println!("total key size: {}", total_key_size);
|
|
|
|
println!("total value size: {}", total_val_size);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
|
|
|
fn average_number_of_words_by_doc(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
|
|
|
|
use heed::types::DecodeIgnore;
|
2020-10-19 19:44:17 +08:00
|
|
|
use crate::{DocumentId, BEU32StrCodec};
|
2020-09-07 20:56:48 +08:00
|
|
|
|
|
|
|
let mut words_counts = Vec::new();
|
|
|
|
let mut count = 0;
|
|
|
|
let mut prev = None as Option<(DocumentId, u32)>;
|
|
|
|
|
|
|
|
let iter = index.docid_word_positions.as_polymorph().iter::<_, BEU32StrCodec, DecodeIgnore>(rtxn)?;
|
|
|
|
for result in iter {
|
|
|
|
let ((docid, _word), ()) = result?;
|
|
|
|
|
|
|
|
match prev.as_mut() {
|
|
|
|
Some((prev_docid, prev_count)) if docid == *prev_docid => {
|
|
|
|
*prev_count += 1;
|
|
|
|
},
|
|
|
|
Some((prev_docid, prev_count)) => {
|
|
|
|
words_counts.push(*prev_count);
|
|
|
|
*prev_docid = docid;
|
|
|
|
*prev_count = 0;
|
|
|
|
count += 1;
|
|
|
|
},
|
|
|
|
None => prev = Some((docid, 1)),
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
if let Some((_, prev_count)) = prev.take() {
|
|
|
|
words_counts.push(prev_count);
|
|
|
|
count += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
let words_count = words_counts.into_iter().map(|c| c as usize).sum::<usize>() as f64;
|
|
|
|
let count = count as f64;
|
|
|
|
|
|
|
|
println!("average number of different words by document: {}", words_count / count);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2020-09-07 21:26:42 +08:00
|
|
|
|
2020-09-30 00:11:44 +08:00
|
|
|
fn average_number_of_positions_by_word(index: &Index, rtxn: &heed::RoTxn) -> anyhow::Result<()> {
|
2020-09-07 21:26:42 +08:00
|
|
|
use heed::types::DecodeIgnore;
|
2020-10-19 19:44:17 +08:00
|
|
|
use crate::BoRoaringBitmapCodec;
|
2020-09-07 21:26:42 +08:00
|
|
|
|
|
|
|
let mut values_length = Vec::new();
|
|
|
|
let mut count = 0;
|
|
|
|
|
2020-09-07 21:42:20 +08:00
|
|
|
let db = index.docid_word_positions.as_polymorph();
|
2020-10-01 16:58:19 +08:00
|
|
|
for result in db.iter::<_, DecodeIgnore, BoRoaringBitmapCodec>(rtxn)? {
|
2020-09-07 21:26:42 +08:00
|
|
|
let ((), val) = result?;
|
|
|
|
values_length.push(val.len() as u32);
|
|
|
|
count += 1;
|
|
|
|
}
|
|
|
|
|
|
|
|
let values_length_sum = values_length.into_iter().map(|c| c as usize).sum::<usize>() as f64;
|
|
|
|
let count = count as f64;
|
|
|
|
|
|
|
|
println!("average number of positions by word: {}", values_length_sum / count);
|
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
2020-09-22 19:52:24 +08:00
|
|
|
|
2020-10-02 22:46:05 +08:00
|
|
|
fn size_of_database(index: &Index, rtxn: &heed::RoTxn, name: &str) -> anyhow::Result<()> {
|
|
|
|
use heed::types::ByteSlice;
|
|
|
|
|
|
|
|
let database = match name {
|
|
|
|
MAIN_DB_NAME => &index.main,
|
|
|
|
WORD_DOCIDS_DB_NAME => index.word_docids.as_polymorph(),
|
|
|
|
DOCID_WORD_POSITIONS_DB_NAME => index.docid_word_positions.as_polymorph(),
|
|
|
|
WORD_PAIR_PROXIMITY_DOCIDS_DB_NAME => index.word_pair_proximity_docids.as_polymorph(),
|
|
|
|
DOCUMENTS_DB_NAME => index.documents.as_polymorph(),
|
2020-10-01 17:23:37 +08:00
|
|
|
unknown => anyhow::bail!("unknown database {:?}", unknown),
|
2020-10-02 22:46:05 +08:00
|
|
|
};
|
|
|
|
|
|
|
|
let mut key_size: u64 = 0;
|
|
|
|
let mut val_size: u64 = 0;
|
|
|
|
for result in database.iter::<_, ByteSlice, ByteSlice>(rtxn)? {
|
|
|
|
let (k, v) = result?;
|
|
|
|
key_size += k.len() as u64;
|
|
|
|
val_size += v.len() as u64;
|
|
|
|
}
|
|
|
|
|
2020-10-01 17:23:37 +08:00
|
|
|
println!("The {} database weigh:", name);
|
|
|
|
println!("\ttotal key size: {} bytes", key_size);
|
|
|
|
println!("\ttotal val size: {} bytes", val_size);
|
|
|
|
println!("\ttotal size: {} bytes", key_size + val_size);
|
2020-10-02 22:46:05 +08:00
|
|
|
|
|
|
|
Ok(())
|
|
|
|
}
|
|
|
|
|
2020-10-01 17:39:30 +08:00
|
|
|
fn database_stats(index: &Index, rtxn: &heed::RoTxn, name: &str) -> anyhow::Result<()> {
|
2020-10-01 17:23:37 +08:00
|
|
|
use heed::types::ByteSlice;
|
|
|
|
use heed::{Error, BytesDecode};
|
2020-10-01 17:39:30 +08:00
|
|
|
use roaring::RoaringBitmap;
|
2020-10-19 19:44:17 +08:00
|
|
|
use crate::{BoRoaringBitmapCodec, CboRoaringBitmapCodec, RoaringBitmapCodec};
|
2020-10-01 17:39:30 +08:00
|
|
|
|
|
|
|
fn compute_stats<'a, DC: BytesDecode<'a, DItem = RoaringBitmap>>(
|
|
|
|
db: heed::PolyDatabase,
|
|
|
|
rtxn: &'a heed::RoTxn,
|
|
|
|
name: &str,
|
|
|
|
) -> anyhow::Result<()>
|
|
|
|
{
|
|
|
|
let mut key_size = 0u64;
|
|
|
|
let mut val_size = 0u64;
|
|
|
|
let mut values_length = Vec::new();
|
|
|
|
|
|
|
|
for result in db.iter::<_, ByteSlice, ByteSlice>(rtxn)? {
|
|
|
|
let (key, val) = result?;
|
|
|
|
key_size += key.len() as u64;
|
|
|
|
val_size += val.len() as u64;
|
|
|
|
let val = DC::bytes_decode(val).ok_or(Error::Decoding)?;
|
|
|
|
values_length.push(val.len() as u32);
|
|
|
|
}
|
2020-09-30 23:41:54 +08:00
|
|
|
|
2020-10-01 17:39:30 +08:00
|
|
|
values_length.sort_unstable();
|
|
|
|
|
2020-10-01 17:48:05 +08:00
|
|
|
let median = values_length.len() / 2;
|
|
|
|
let quartile = values_length.len() / 4;
|
|
|
|
let percentile = values_length.len() / 100;
|
|
|
|
|
|
|
|
let twenty_five_percentile = values_length.get(quartile).unwrap_or(&0);
|
|
|
|
let fifty_percentile = values_length.get(median).unwrap_or(&0);
|
|
|
|
let seventy_five_percentile = values_length.get(quartile * 3).unwrap_or(&0);
|
|
|
|
let ninety_percentile = values_length.get(percentile * 90).unwrap_or(&0);
|
|
|
|
let ninety_five_percentile = values_length.get(percentile * 95).unwrap_or(&0);
|
|
|
|
let ninety_nine_percentile = values_length.get(percentile * 99).unwrap_or(&0);
|
2020-10-01 17:39:30 +08:00
|
|
|
let minimum = values_length.first().unwrap_or(&0);
|
|
|
|
let maximum = values_length.last().unwrap_or(&0);
|
|
|
|
let count = values_length.len();
|
|
|
|
let sum = values_length.iter().map(|l| *l as u64).sum::<u64>();
|
|
|
|
|
|
|
|
println!("The {} database stats on the lengths", name);
|
|
|
|
println!("\tnumber of proximity pairs: {}", count);
|
2020-10-01 17:48:05 +08:00
|
|
|
println!("\t25th percentile (first quartile): {}", twenty_five_percentile);
|
|
|
|
println!("\t50th percentile (median): {}", fifty_percentile);
|
|
|
|
println!("\t75th percentile (third quartile): {}", seventy_five_percentile);
|
2020-10-01 17:39:30 +08:00
|
|
|
println!("\t90th percentile: {}", ninety_percentile);
|
|
|
|
println!("\t95th percentile: {}", ninety_five_percentile);
|
|
|
|
println!("\t99th percentile: {}", ninety_nine_percentile);
|
|
|
|
println!("\tminimum: {}", minimum);
|
|
|
|
println!("\tmaximum: {}", maximum);
|
|
|
|
println!("\taverage: {}", sum as f64 / count as f64);
|
|
|
|
println!("\ttotal key size: {} bytes", key_size);
|
|
|
|
println!("\ttotal val size: {} bytes", val_size);
|
|
|
|
println!("\ttotal size: {} bytes", key_size + val_size);
|
|
|
|
|
|
|
|
Ok(())
|
2020-09-30 23:41:54 +08:00
|
|
|
}
|
|
|
|
|
2020-10-01 17:39:30 +08:00
|
|
|
match name {
|
|
|
|
WORD_DOCIDS_DB_NAME => {
|
|
|
|
let db = index.word_docids.as_polymorph();
|
|
|
|
compute_stats::<RoaringBitmapCodec>(*db, rtxn, name)
|
|
|
|
},
|
|
|
|
DOCID_WORD_POSITIONS_DB_NAME => {
|
|
|
|
let db = index.docid_word_positions.as_polymorph();
|
|
|
|
compute_stats::<BoRoaringBitmapCodec>(*db, rtxn, name)
|
|
|
|
},
|
|
|
|
WORD_PAIR_PROXIMITY_DOCIDS_DB_NAME => {
|
|
|
|
let db = index.word_pair_proximity_docids.as_polymorph();
|
|
|
|
compute_stats::<CboRoaringBitmapCodec>(*db, rtxn, name)
|
|
|
|
},
|
|
|
|
unknown => anyhow::bail!("unknown database {:?}", unknown),
|
|
|
|
}
|
2020-09-30 23:41:54 +08:00
|
|
|
}
|
|
|
|
|
2020-09-22 19:52:24 +08:00
|
|
|
fn word_pair_proximities_docids(
|
|
|
|
index: &Index,
|
|
|
|
rtxn: &heed::RoTxn,
|
|
|
|
debug: bool,
|
|
|
|
word1: String,
|
|
|
|
word2: String,
|
|
|
|
) -> anyhow::Result<()>
|
|
|
|
{
|
|
|
|
use heed::types::ByteSlice;
|
2020-10-19 19:44:17 +08:00
|
|
|
use crate::RoaringBitmapCodec;
|
2020-09-22 19:52:24 +08:00
|
|
|
|
|
|
|
let stdout = io::stdout();
|
|
|
|
let mut wtr = csv::Writer::from_writer(stdout.lock());
|
|
|
|
wtr.write_record(&["word1", "word2", "proximity", "documents_ids"])?;
|
|
|
|
|
|
|
|
// Create the prefix key with only the pair of words.
|
2020-09-22 20:49:22 +08:00
|
|
|
let mut prefix = Vec::with_capacity(word1.len() + word2.len() + 1);
|
|
|
|
prefix.extend_from_slice(word1.as_bytes());
|
2020-09-22 19:52:24 +08:00
|
|
|
prefix.push(0);
|
2020-09-22 20:49:22 +08:00
|
|
|
prefix.extend_from_slice(word2.as_bytes());
|
2020-09-22 19:52:24 +08:00
|
|
|
|
|
|
|
let db = index.word_pair_proximity_docids.as_polymorph();
|
|
|
|
let iter = db.prefix_iter::<_, ByteSlice, RoaringBitmapCodec>(rtxn, &prefix)?;
|
|
|
|
for result in iter {
|
|
|
|
let (key, docids) = result?;
|
|
|
|
|
|
|
|
// Skip keys that are longer than the requested one,
|
|
|
|
// a longer key means that the second word is a prefix of the request word.
|
|
|
|
if key.len() != prefix.len() + 1 { continue; }
|
|
|
|
|
|
|
|
let proximity = key.last().unwrap();
|
|
|
|
let docids = if debug {
|
|
|
|
format!("{:?}", docids)
|
|
|
|
} else {
|
|
|
|
format!("{:?}", docids.iter().collect::<Vec<_>>())
|
|
|
|
};
|
2020-09-22 20:49:22 +08:00
|
|
|
wtr.write_record(&[&word1, &word2, &proximity.to_string(), &docids])?;
|
2020-09-22 19:52:24 +08:00
|
|
|
}
|
|
|
|
|
|
|
|
Ok(wtr.flush()?)
|
|
|
|
}
|